RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 ATAD5Q96QE3 1844 aa10.14□□□□□ -0.79
SCARNA20.3-201ENST00000516913 CYP2D7A0A087X1C5 515 aa10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 SPDYE16A6NNV3 312 aaPredicted RBP10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 XRCC5P13010 732 aaKnown RBP10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 VCAM1P19320 739 aa10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 SEPT2Q15019 361 aa10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 CCDC158Q5M9N0 1113 aa10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 CATSPERGQ6ZRH7 1159 aa10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 NECAB2Q7Z6G3 386 aa10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 PNMA3Q9UL41 463 aa10.13□□□□□ -0.79
SCARNA20.3-201ENST00000516913 C19orf81C9J6K1 198 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 COBLO75128 1261 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 BAG3O95817 575 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 PDE6AP16499 860 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 IRX3P78415 501 aaPredicted RBP10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 AACSQ86V21 672 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 ITPRIPQ8IWB1 547 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 LCORLQ8N3X6 602 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 SDR42E1Q8WUS8 393 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 NR2E3Q9Y5X4 410 aa10.12□□□□□ -0.79
SCARNA20.3-201ENST00000516913 CYP2C19P33261 490 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 BMP8BP34820 402 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 HNRNPUQ00839 825 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 OS9Q13438 667 aaPredicted RBP10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 C20orf194Q5TEA3 1177 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L2Q6R6M4 530 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 PLEKHH3Q7Z736 793 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 CRACR2BQ8N4Y2 399 aaPredicted RBP10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 ANKLE1Q8NAG6 615 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 RHPN1Q8TCX5 695 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 KIAA1683Q9H0B3 1180 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 EHD4Q9H223 541 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 C11orf49Q9H6J7 331 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 AS3MTQ9HBK9 375 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 DCP1AQ9NPI6 582 aaPredicted RBP10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 CHD7Q9P2D1 2997 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 SERPINB13Q9UIV8 391 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 FOCADQ5VW36 1801 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 RLFQ13129 1914 aa10.11□□□□□ -0.79
SCARNA20.3-201ENST00000516913 DDX60LQ5H9U9 1706 aaKnown RBP10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L15C9J2P7 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L13C9JLJ4 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L11C9JVI0 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L18D6R9N7 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L22D6RA61 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L17D6RBQ6 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L19D6RCP7 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L20D6RJB6 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 AKR1B1P15121 316 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 PLCG2P16885 1265 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 PTPREP23469 700 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 USP17L24Q0WX57 530 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 MAP2K5Q13163 448 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 PABPC4Q13310 644 aaKnown RBP eCLIP10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 GRB14Q14449 540 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 RAB3GAP1Q15042 981 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 CERKLQ49MI3 558 aaPredicted RBP10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 PRAMEF19Q5SWL8 479 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 ANO1Q5XXA6 986 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 LBX2Q6XYB7 198 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 NUDT12Q9BQG2 462 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 MOV10L1Q9BXT6 1211 aaKnown RBP10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 RPAP3Q9H6T3 665 aaPredicted RBP10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 ARMT1Q9H993 441 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 ZBTB40Q9NUA8 1239 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 TMOD4Q9NZQ9 345 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 RABGAP1Q9Y3P9 1069 aa10.1□□□□□ -0.79
SCARNA20.3-201ENST00000516913 ZNF532Q9HCE3 1301 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 MAST2Q6P0Q8 1798 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 RBAK-RBAKDNI3L0D1 243 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 APBB1O00213 710 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 GOLIM4O00461 696 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 HOXC6P09630 235 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 MAPK4P31152 587 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 MDM2Q00987 491 aaPredicted RBP10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 ABCB5Q2M3G0 1257 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 SLC9C2Q5TAH2 1124 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 GINM1Q9NU53 330 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 FBXO28Q9NVF7 368 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 MTMR10Q9NXD2 777 aa10.09□□□□□ -0.79
SCARNA20.3-201ENST00000516913 A0A1W2PPC1 479 aa10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SMARCA5O60264 1052 aaPredicted RBP10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 CYBAP13498 195 aa10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TAL1P17542 331 aaPredicted RBP10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ITGB8P26012 769 aa10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 USP5P45974 858 aa10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 IRX5P78411 483 aaPredicted RBP10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 APBA2Q99767 749 aa10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 NOL10Q9BSC4 688 aaKnown RBP10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 REV3LO60673 3130 aa10.08□□□□□ -0.8
SCARNA20.3-201ENST00000516913 MAGEB6P1A0A0J9YX57 407 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SLC15A5A6NIM6 579 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 HLA-DOAP06340 250 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 RGS2P41220 211 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ATN1P54259 1190 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms