RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PPARAQ07869 468 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 USP17L2Q6R6M4 530 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 ACER1Q8TDN7 264 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 KANSL2Q9H9L4 492 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 CCDC171Q6TFL3 1326 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 PHIPQ8WWQ0 1821 aa13.29□□□□□ -0.28
SCARNA20-201ENST00000516768 DDX60LQ5H9U9 1706 aaKnown RBP13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 SLC3A2P08195 630 aaKnown RBP13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 CHMLP26374 656 aa13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 USP14P54578 494 aa13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 PDE4BQ07343 736 aa13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 DGKZQ13574 1117 aa13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 C12orf42Q96LP6 360 aa13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 PARK7Q99497 189 aaKnown RBP13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 CPA4Q9UI42 421 aa13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 ROBO3Q96MS0 1386 aa13.28□□□□□ -0.28
SCARNA20-201ENST00000516768 FGRP09769 529 aa13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 OSBPP22059 807 aa13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 ERO1AQ96HE7 468 aa13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 ASCC2Q9H1I8 757 aaPredicted RBP13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 PNMA3Q9UL41 463 aa13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 TMX2Q9Y320 296 aa13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 ADGRA2Q96PE1 1338 aa13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 NAV1Q8NEY1 1877 aa13.27□□□□□ -0.29
SCARNA20-201ENST00000516768 PRDM1O75626 825 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 BCRP11274 1271 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 EEF2P13639 858 aaKnown RBP13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 CAP1Q01518 475 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 CTDSPL2Q05D32 466 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 ARHGEF6Q15052 776 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 SKAP1Q86WV1 359 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 RUFY2Q8WXA3 655 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 P2RX7Q99572 595 aaKnown RBP13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 FEZ1Q99689 392 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 MCOLN1Q9GZU1 580 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 ARHGEF10LQ9HCE6 1279 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 GCLCP48506 637 aaPredicted RBP13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 TFAP4Q01664 338 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 ICA1Q05084 483 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 CATSPERGQ6ZRH7 1159 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 NEDD1Q8NHV4 660 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 SMCR8Q8TEV9 937 aaPredicted RBP13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 MKL1Q969V6 931 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 IL25Q9H293 177 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 NYAP2Q9P242 653 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 ATAD5Q96QE3 1844 aa13.25□□□□□ -0.29
SCARNA20-201ENST00000516768 IGKV6D-41A0A0C4DH26 115 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 VCAM1P19320 739 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 IRX3P78415 501 aaPredicted RBP13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 KIF22Q14807 665 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 BMP2KLQ5H9B9 411 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 FAM47AQ5JRC9 791 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 KIAA1755Q5JYT7 1200 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 CLEC10AQ8IUN9 316 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 SH2D4AQ9H788 454 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 EFCC1Q9HA90 598 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
SCARNA20-201ENST00000516768 PTPRFP10586 1907 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 ZNF213O14771 459 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 ORC4O43929 436 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 GNRH1P01148 92 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 POTEEQ6S8J3 1075 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 LPAR1Q92633 364 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 VCPKMTQ9H867 229 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 HOXC10Q9NYD6 342 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 CTNNA3Q9UI47 895 aa13.23□□□□□ -0.29
SCARNA20-201ENST00000516768 RAD50Q92878 1312 aa13.22□□□□□ -0.29
SCARNA20-201ENST00000516768 SGSM2O43147 1006 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms