RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NPM2Q86SE8 214 aaKnown RBP4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 OGFOD1Q8N543 542 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 ARRDC4Q8NCT1 418 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 CRELD1Q96HD1 420 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 MTUS1Q9ULD2 1270 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 ZNF652Q9Y2D9 606 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 HCFC2Q9Y5Z7 792 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 DOCK3Q8IZD9 2030 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 ZNF804BA4D1E1 1349 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 CAPN8A6NHC0 703 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 G3V3G9 751 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 BBOX1O75936 387 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 STARD3NLO95772 234 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 CAPNS1P04632 268 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 CFHP08603 1231 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 CNGA1P29973 690 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 CFHR1Q03591 330 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 DLX2Q07687 328 aaPredicted RBP4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 HSP90AB2PQ58FF8 381 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 DCAF8Q5TAQ9 597 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 RPAINQ86UA6 219 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 RPGRIP1Q96KN7 1286 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 PPP1R12CQ9BZL4 782 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 SUGCTQ9HAC7 445 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 VEZTQ9HBM0 779 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 HSPBP1Q9NZL4 362 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 POLLQ9UGP5 575 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 TBX21Q9UL17 535 aa4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 SMG5Q9UPR3 1016 aaKnown RBP4.55□□□□□ -1.68
SCARNA13-201ENST00000516672 PLXNB2O15031 1838 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 CCDC194A0A1B0GVG4 234 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 TM4SF5O14894 197 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 WIPF1O43516 503 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 MSCO60682 206 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 SLC39A6Q13433 755 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 NEUROD2Q15784 382 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 CCL14Q16627 93 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 TCEAL5Q5H9L2 206 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 GPAT2Q6NUI2 795 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 PSAPL1Q6NUJ1 521 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 TRMT44Q8IYL2 757 aaKnown RBP4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 MMP21Q8N119 569 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 ANKRD13CQ8N6S4 541 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 LSM14AQ8ND56 463 aaKnown RBP4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 JARID2Q92833 1246 aaPredicted RBP4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 ZBED3Q96IU2 234 aaPredicted RBP4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 EYA3Q99504 573 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 MKNK1Q9BUB5 465 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 MXD3Q9BW11 206 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 FANCMQ8IYD8 2048 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 COL4A1P02462 1669 aa4.54□□□□□ -1.68
SCARNA13-201ENST00000516672 CAPN9O14815 690 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 HIST2H2BCQ6DN03 193 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 SNRNP48Q6IEG0 339 aaKnown RBP4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 UBALD2Q8IYN6 164 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 VSIG10Q8N0Z9 540 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 KREMEN2Q8NCW0 462 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 SMCR8Q8TEV9 937 aaPredicted RBP4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 NLRP3Q96P20 1036 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 RTP3Q9BQQ7 232 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 NYXQ9GZU5 481 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 SCUBE2Q9NQ36 999 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 CD207Q9UJ71 328 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 GMEB2Q9UKD1 530 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 NSFL1CQ9UNZ2 370 aaKnown RBP4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 DOPEY2Q9Y3R5 2298 aa4.53□□□□□ -1.68
SCARNA13-201ENST00000516672 LOC285556D6RIA3 1793 aa4.53□□□□□ -1.69
SCARNA13-201ENST00000516672 RFX7Q2KHR2 1363 aa4.53□□□□□ -1.69
SCARNA13-201ENST00000516672 CNTNAP5Q8WYK1 1306 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 PSME4Q14997 1843 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 ST20-MTHFSA0A0A6YYL1 179 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 BLACEA4D250 179 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 USP17L3A6NCW0 530 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 USP17L4A6NCW7 530 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 POTEMA6NI47 508 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 SPTLC1O15269 473 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 BRD1O95696 1058 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 XRCC5P13010 732 aaKnown RBP4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 TNNT2P45379 298 aaPredicted RBP4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 MTHFSP49914 203 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 PPATQ06203 517 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 ZNF252P-AS1Q0IIN9 211 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 RASA3Q14644 834 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 TIGD5Q53EQ6 642 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 POTEGQ6S5H5 508 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 PRR23CQ6ZRP0 262 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 USP17L1Q7RTZ2 530 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 ANKRD33Q7Z3H0 272 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 BANK1Q8NDB2 785 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 TOX2Q96NM4 488 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 ZC3H12CQ9C0D7 883 aaKnown RBP4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 EMILIN1Q9Y6C2 1016 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 SHROOM3Q8TF72 1996 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 EDC4Q6P2E9 1401 aaKnown RBP4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 CSMD1Q96PZ7 3565 aa4.52□□□□□ -1.69
SCARNA13-201ENST00000516672 MAST3O60307 1309 aa4.51□□□□□ -1.69
SCARNA13-201ENST00000516672 FAM221BA6H8Z2 402 aa4.51□□□□□ -1.69
SCARNA13-201ENST00000516672 BTBD11A6QL63 1104 aa4.51□□□□□ -1.69
SCARNA13-201ENST00000516672 KIF28PB7ZC32 967 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms