RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 RIN3Q8TB24 985 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 SH3RF3Q8TEJ3 882 aaPredicted RBP2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 SAMD11Q96NU1 681 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 USP40Q9NVE5 1235 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 SEPT3Q9UH03 358 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 EBF1Q9UH73 591 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 ING1Q9UK53 422 aaPredicted RBP2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 CSADQ9Y600 493 aa2.36□□□□□ -2.03
SCARNA23-201ENST00000516060 NOTOA8MTQ0 251 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 FANCGO15287 622 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 EFEMP2O95967 443 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 TPP2P29144 1249 aaPredicted RBP2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 EIF1AXP47813 144 aaKnown RBP2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 YBX1P67809 324 aaKnown RBP2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 EHHADHQ08426 723 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 SMN1Q16637 294 aaKnown RBP2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 CDC37L1Q7L3B6 337 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 SIRT2Q8IXJ6 389 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 STK35Q8TDR2 534 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 DHX38Q92620 1227 aaKnown RBP2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 MIPEPQ99797 713 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 ZNF747Q9BV97 191 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 DUSP15Q9H1R2 295 aaPredicted RBP2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 CACNA2D2Q9NY47 1150 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 PCSK5Q92824 1860 aa2.35□□□□□ -2.03
SCARNA23-201ENST00000516060 RFX1P22670 979 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 FBLN1P23142 703 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 CNR2P34972 360 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 KIR3DL1P43629 444 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 CHRNEQ04844 493 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 EGR3Q06889 387 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 NLRX1Q86UT6 975 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 C12orf40Q86WS4 652 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 LDHDQ86WU2 507 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 KCT2Q8NC54 265 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 PIWIL2Q8TC59 973 aaKnown RBP2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 GPBAR1Q8TDU6 330 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 DDX1Q92499 740 aaKnown RBP2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 DVL3Q92997 716 aaPredicted RBP2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 LOXL4Q96JB6 756 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 EHD4Q9H223 541 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 ABCB6Q9NP58 842 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 ZMIZ1Q9ULJ6 1067 aa2.34□□□□□ -2.03
SCARNA23-201ENST00000516060 DCDC2CA8MYV0 355 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 MPSTP25325 297 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 SLBPQ14493 270 aaKnown RBP eCLIP2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 CDSNQ15517 529 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 CDCA8Q53HL2 280 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 LRCH2Q5VUJ6 765 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 MAP1SQ66K74 1059 aaPredicted RBP2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 ZNF746Q6NUN9 644 aaPredicted RBP2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 LETMD1Q6P1Q0 360 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 MPRIPQ6WCQ1 1025 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 ADGRG2Q8IZP9 1017 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 ANKS4BQ8N8V4 417 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 HELQQ8TDG4 1101 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 COX4I2Q96KJ9 171 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 SPATA25Q9BR10 227 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 VPS11Q9H270 941 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 PICK1Q9NRD5 415 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 DUSP13Q9UII6 198 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 PCDHA5Q9Y5H7 936 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 HS3ST3A1Q9Y663 406 aa2.33□□□□□ -2.04
SCARNA23-201ENST00000516060 A0A1B0GTL3 188 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 TMEM238LA0A1B0GVL6 79 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 SDHBP21912 280 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 ARNTP27540 789 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 USP5P45974 858 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 INHBEP58166 350 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 ZNF252P-AS1Q0IIN9 211 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 VWA3BQ502W6 1294 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 USPL1Q5W0Q7 1092 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 PRPF40BQ6NWY9 871 aaKnown RBP2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 LIPIQ6XZB0 460 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 SULF2Q8IWU5 870 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 MFSD2AQ8NA29 543 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 ZNF507Q8TCN5 953 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 LINC01599Q8WXQ3 324 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 LNPKQ9C0E8 428 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 FBRSQ9HAH7 460 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 CRTAC1Q9NQ79 661 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 DLL4Q9NR61 685 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 TMEM39AQ9NV64 488 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 ZNF777Q9ULD5 760 aaPredicted RBP2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 TSC22D4Q9Y3Q8 395 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 PCDHA11Q9Y5I1 949 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 LTBP3Q9NS15 1303 aa2.32□□□□□ -2.04
SCARNA23-201ENST00000516060 ABLIM1O14639 778 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 NOBOXO60393 691 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 BUB1BO60566 1050 aaPredicted RBP2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 AMHP03971 560 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 CYP7A1P22680 504 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 CAP2P40123 477 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 TGFB2P61812 414 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 PPP2R3AQ06190 1150 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 DUSP4Q13115 394 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 CFAP70Q5T0N1 1121 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 OLFML2BQ68BL8 750 aa2.31□□□□□ -2.04
SCARNA23-201ENST00000516060 ALKBH2Q6NS38 261 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms