RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 EIF4EBP3O60516 100 aaPredicted RBP0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 CYP11A1P05108 521 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 NEFMP07197 916 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 CCKBRP32239 447 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 WASP42768 502 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 HTRA3P83110 453 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 FGD1P98174 961 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 TTC39BQ5VTQ0 682 aaPredicted RBP0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 NLRX1Q86UT6 975 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 CREG2Q8IUH2 290 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 SMG7Q92540 1137 aaKnown RBP0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 ISL2Q96A47 359 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 TTPALQ9BTX7 342 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 RSPH6AQ9H0K4 717 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 VPS33BQ9H267 617 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 DISC1Q9NRI5 854 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 DZANK1Q9NVP4 752 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 CAPN6Q9Y6Q1 641 aa0.78□□□□□ -2.28
SCARNA21.1-201ENST00000515996 NOTOA8MTQ0 251 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PATE3B3GLJ2 98 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PRR23D1E9PI22 279 aaPredicted RBP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 U2SURPO15042 1029 aaKnown RBP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 LAMTOR5O43504 91 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PRR23D2P0DMB1 279 aaPredicted RBP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ID3Q02535 119 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CHRNEQ04844 493 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PDE3AQ14432 1141 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 KRTAP13-3Q3SY46 172 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 USP39Q53GS9 565 aaKnown RBP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PRR16Q569H4 304 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 RUSC1-AS1Q66K80 236 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 Q6ZPA2 131 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 C22orf34Q6ZV56 151 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PHF6Q8IWS0 365 aaKnown RBP eCLIP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CHMP7Q8WUX9 453 aaPredicted RBP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SMARCC1Q92922 1105 aaPredicted RBP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PRRX2Q99811 253 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CORO1BQ9BR76 489 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 GNL3Q9BVP2 549 aaKnown RBP eCLIP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 MMRN2Q9H8L6 949 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 KANSL3Q9P2N6 904 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SYNGAP1Q96PV0 1343 aa0.77□□□□□ -2.29
SCARNA21.1-201ENST00000515996 NPEPPSL1A6NEC2 478 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 WASH4PA8MWX3 477 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 UBAP1LF5GYI3 381 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TRIM38O00635 465 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZNF623O75123 536 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZFPL1O95159 310 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PFKLP17858 780 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 RFX1P22670 979 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 FSTL1Q12841 308 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 FNDC7Q5VTL7 733 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 BORAQ6PGQ7 559 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ADGRG3Q86Y34 549 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SPPL2CQ8IUH8 684 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TMEM102Q8N9M5 508 aaPredicted RBP0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PROCA1Q8NCQ7 364 aaPredicted RBP0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ADAMTS17Q8TE56 1095 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 DHX38Q92620 1227 aaKnown RBP0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 RIOX1Q9H6W3 641 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZFYVE1Q9HBF4 777 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SSU72Q9NP77 194 aaKnown RBP0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 KLHL14Q9P2G3 628 aa0.76□□□□□ -2.29
SCARNA21.1-201ENST00000515996 FOXN1O15353 648 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TNFRSF1BP20333 461 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SARSP49591 514 aaKnown RBP0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 VAC14Q08AM6 782 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 PRKD1Q15139 912 aaPredicted RBP0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 RGL3Q3MIN7 710 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SCARA3Q6AZY7 606 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 DLK2Q6UY11 383 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ANKS4BQ8N8V4 417 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TSEN2Q8NCE0 465 aaKnown RBP0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TPCN2Q8NHX9 752 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 EXTL1Q92935 676 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 DDX11Q96FC9 970 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 WDR89Q96FK6 387 aaPredicted RBP0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 TRIM56Q9BRZ2 755 aaKnown RBP0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 GGNBP2Q9H3C7 697 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 CRTAC1Q9NQ79 661 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ABI2Q9NYB9 513 aaPredicted RBP0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 EBF1Q9UH73 591 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZNF580Q9UK33 172 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 NOD1Q9Y239 953 aa0.75□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ATAD2Q6PL18 1390 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 MYADML2A6NDP7 307 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 LMNAP02545 664 aaKnown RBP0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 C1SP09871 688 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 MAKP20794 623 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ERVFRD-1P60508 538 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 FOXO4P98177 505 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 EGR3Q06889 387 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 GRM2Q14416 872 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 SFRP5Q5T4F7 317 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 GPR150Q8NGU9 434 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 Q8TCH9 128 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ASAP3Q8TDY4 903 aa0.74□□□□□ -2.29
SCARNA21.1-201ENST00000515996 ZNF483Q8TF39 744 aaPredicted RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms