RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 CACNB3P54284 484 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 RTN1Q16799 776 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 CATIPQ7Z7H3 387 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 FAM184AQ8NB25 1140 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 MYL10Q9BUA6 226 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 MYOZ2Q9NPC6 264 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 RBM28Q9NW13 759 aaKnown RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 MYH1P12882 1939 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 TBC1D12O60347 775 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 DTNBO60941 627 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 RXRAP19793 462 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 PTMSP20962 102 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 TCP10Q12799 353 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 ARHGAP27Q6ZUM4 889 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 FBXO18Q8NFZ0 1043 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 DDX11Q96FC9 970 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 TMEM47Q9BQJ4 181 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 MTMR4Q9NYA4 1195 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 TMOD2Q9NZR1 351 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 ORC3Q9UBD5 711 aaPredicted RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 HERC5Q9UII4 1024 aaKnown RBP10.3□□□□□ -0.76
CAST-244ENST00000515663 ATP6V1DQ9Y5K8 247 aa10.3□□□□□ -0.76
CAST-244ENST00000515663 ZNF541Q9H0D2 1346 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 TOP1P11387 765 aaKnown RBP10.29□□□□□ -0.76
CAST-244ENST00000515663 AKR1B1P15121 316 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 YBX3P16989 372 aaKnown RBP eCLIP10.29□□□□□ -0.76
CAST-244ENST00000515663 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 NBPF9Q3BBW0 867 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 CDC37L1Q7L3B6 337 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 RAB11FIP4Q86YS3 637 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 GPC2Q8N158 579 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 PNMA1Q8ND90 353 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
CAST-244ENST00000515663 ZSCAN16Q9H4T2 348 aaPredicted RBP10.29□□□□□ -0.76
CAST-244ENST00000515663 CNOT7Q9UIV1 285 aaKnown RBP10.29□□□□□ -0.76
CAST-244ENST00000515663 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 SHTN1A0MZ66 631 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
CAST-244ENST00000515663 PRPF3O43395 683 aaKnown RBP10.28□□□□□ -0.76
CAST-244ENST00000515663 MYO1BO43795 1136 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 SNHG28P0DPA3 235 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 PRKAR2AP13861 404 aaKnown RBP10.28□□□□□ -0.76
CAST-244ENST00000515663 SSRP1Q08945 709 aaKnown RBP10.28□□□□□ -0.76
CAST-244ENST00000515663 RESTQ13127 1097 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 GRM4Q14833 912 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 TMTC3Q6ZXV5 915 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 TMEM87AQ8NBN3 555 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 MKL1Q969V6 931 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 KAT14Q9H8E8 782 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
CAST-244ENST00000515663 GREB1LQ9C091 1923 aaPredicted RBP10.27□□□□□ -0.77
CAST-244ENST00000515663 CLRN2A0PK11 232 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 VPS37CA5D8V6 355 aaPredicted RBP10.27□□□□□ -0.77
CAST-244ENST00000515663 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 DEXIO95424 95 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 KIF5BP33176 963 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 GNAQP50148 359 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 CCDC144CPQ8IYA2 1237 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 CTCFLQ8NI51 663 aaPredicted RBP10.27□□□□□ -0.77
CAST-244ENST00000515663 NUP133Q8WUM0 1156 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 WASF1Q92558 559 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 PHKBQ93100 1093 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 GPRC5DQ9NZD1 345 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 NYAP2Q9P242 653 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 SYNPO2Q9UMS6 1093 aa10.27□□□□□ -0.77
CAST-244ENST00000515663 GOLGA6L22H0YM25 854 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 H3BQV1 296 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 TTLL1O95922 423 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 EGFRP00533 1210 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 PKN1Q16512 942 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 CERKLQ49MI3 558 aaPredicted RBP10.26□□□□□ -0.77
CAST-244ENST00000515663 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 ATL3Q6DD88 541 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 TMEM179Q6ZVK1 233 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 ZSCAN29Q8IWY8 852 aaPredicted RBP10.26□□□□□ -0.77
CAST-244ENST00000515663 TRIM22Q8IYM9 498 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 SRBD1Q8N5C6 995 aaKnown RBP10.26□□□□□ -0.77
CAST-244ENST00000515663 C8orf76Q96K31 380 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 TEPSINQ96N21 525 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 CSRNP1Q96S65 589 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 LZTS2Q9BRK4 669 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 ALG1Q9BT22 464 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 RBM27Q9P2N5 1060 aaKnown RBP10.26□□□□□ -0.77
CAST-244ENST00000515663 MAD2L2Q9UI95 211 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 STX8Q9UNK0 236 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 DICER1Q9UPY3 1922 aaKnown RBP10.26□□□□□ -0.77
CAST-244ENST00000515663 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
CAST-244ENST00000515663 H7C1D1 291 aa10.25□□□□□ -0.77
CAST-244ENST00000515663 PLEKHA8P1O95397 391 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms