RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 TSPY2A6NKD2 308 aa17.83■□□□□ 0.44
PDCD6-211ENST00000515587 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
PDCD6-211ENST00000515587 CYP21A2P08686 494 aa17.83■□□□□ 0.44
PDCD6-211ENST00000515587 TFAP4Q01664 338 aa17.83■□□□□ 0.44
PDCD6-211ENST00000515587 TRDNQ13061 729 aa17.83■□□□□ 0.44
PDCD6-211ENST00000515587 MKRN3Q13064 507 aaKnown RBP17.83■□□□□ 0.44
PDCD6-211ENST00000515587 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
PDCD6-211ENST00000515587 KRT23Q9C075 422 aa17.83■□□□□ 0.44
PDCD6-211ENST00000515587 NBPF3Q9H094 633 aa17.83■□□□□ 0.44
PDCD6-211ENST00000515587 FGRP09769 529 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
PDCD6-211ENST00000515587 FXR1P51114 621 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDCD6-211ENST00000515587 GTF2A2P52657 109 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 JAG1P78504 1218 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 SNAPC2Q13487 334 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 SEPT2Q15019 361 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
PDCD6-211ENST00000515587 ZNF280CQ8ND82 737 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 ESR2Q92731 530 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 INCENPQ9NQS7 918 aa17.82■□□□□ 0.44
PDCD6-211ENST00000515587 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.82■□□□□ 0.44
PDCD6-211ENST00000515587 GREB1LQ9C091 1923 aaPredicted RBP17.82■□□□□ 0.44
PDCD6-211ENST00000515587 MYH4Q9Y623 1939 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 MANSC4A6NHS7 340 aaPredicted RBP17.81■□□□□ 0.44
PDCD6-211ENST00000515587 CXCL11O14625 94 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 IRF6O14896 467 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 SLC27A2O14975 620 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 MCCP23508 829 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 GJA5P36382 358 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 SREBF2Q12772 1141 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 SHROOM1Q2M3G4 852 aaPredicted RBP17.81■□□□□ 0.44
PDCD6-211ENST00000515587 FAM47AQ5JRC9 791 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
PDCD6-211ENST00000515587 NEDD1Q8NHV4 660 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 WDR18Q9BV38 432 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 AFG3L2Q9Y4W6 797 aa17.81■□□□□ 0.44
PDCD6-211ENST00000515587 PTPRFP10586 1907 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 TRIM75PA6NK02 468 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 CETPP11597 493 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 INHBEP58166 350 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 ICA1Q05084 483 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 SPP2Q13103 211 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 CCDC84Q86UT8 332 aaPredicted RBP17.8■□□□□ 0.44
PDCD6-211ENST00000515587 FEZ1Q99689 392 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 SH2D4AQ9H788 454 aa17.8■□□□□ 0.44
PDCD6-211ENST00000515587 PLIN4Q96Q06 1357 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 NEDD4P46934 1319 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 E7EWF7 191 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 GUCY1A2P33402 732 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 ATP2B2Q01814 1243 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 KCNH4Q9UQ05 1017 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 TACC3Q9Y6A5 838 aa17.79■□□□□ 0.44
PDCD6-211ENST00000515587 CCL15-CCL14A0A0B4J2E2 113 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 B4E1Z4 1266 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 C19orf81C9J6K1 198 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 USP17L10C9JJH3 530 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 KDM4AO75164 1064 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 USP14P54578 494 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 KRT32Q14532 448 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 PKN2Q16513 984 aaKnown RBP17.78■□□□□ 0.44
PDCD6-211ENST00000515587 CCL15Q16663 113 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 CCDC178Q5BJE1 867 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 OTUD7BQ6GQQ9 843 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 USP26Q9BXU7 913 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 TMOD4Q9NZQ9 345 aa17.78■□□□□ 0.44
PDCD6-211ENST00000515587 HSPA4P34932 840 aa17.77■□□□□ 0.44
PDCD6-211ENST00000515587 BACE1P56817 501 aa17.77■□□□□ 0.44
PDCD6-211ENST00000515587 MTMR2Q13614 643 aa17.77■□□□□ 0.44
PDCD6-211ENST00000515587 C8orf34Q49A92 452 aa17.77■□□□□ 0.44
PDCD6-211ENST00000515587 GADL1Q6ZQY3 521 aa17.77■□□□□ 0.44
PDCD6-211ENST00000515587 FASTKD5Q7L8L6 764 aaKnown RBP17.77■□□□□ 0.44
PDCD6-211ENST00000515587 ZNF296Q8WUU4 475 aaPredicted RBP17.77■□□□□ 0.44
PDCD6-211ENST00000515587 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDCD6-211ENST00000515587 LOC285556D6RIA3 1793 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 IGKV6D-41A0A0C4DH26 115 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 A0A0G2JLL6 359 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-211ENST00000515587 TTLL1O95922 423 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 EEF2P13639 858 aaKnown RBP17.76■□□□□ 0.43
PDCD6-211ENST00000515587 USP17L2Q6R6M4 530 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 PRRT2Q7Z6L0 340 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-211ENST00000515587 CEP95Q96GE4 821 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 MS4A4AQ96JQ5 239 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 UBAC1Q9BSL1 405 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 KIAA1683Q9H0B3 1180 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 TCP11L1Q9NUJ3 509 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 MTMR4Q9NYA4 1195 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 NYAP2Q9P242 653 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 CLIP2Q9UDT6 1046 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 STX8Q9UNK0 236 aa17.76■□□□□ 0.43
PDCD6-211ENST00000515587 TM4SF4P48230 202 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 HMGCS2P54868 508 aa17.75■□□□□ 0.43
PDCD6-211ENST00000515587 SART3Q15020 963 aaKnown RBP17.75■□□□□ 0.43
PDCD6-211ENST00000515587 ZYXQ15942 572 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms