RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SYNRGQ9UMZ2 1314 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 PRC1O43663 620 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 EZRP15311 586 aaKnown RBP14.4□□□□□ -0.1
SMAD1-215ENST00000515385 FXR1P51114 621 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMAD1-215ENST00000515385 NNTQ13423 1086 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 TRIM29Q14134 588 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 DDX46Q7L014 1031 aaKnown RBP14.4□□□□□ -0.1
SMAD1-215ENST00000515385 CHST3Q7LGC8 479 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 EPN1Q9Y6I3 576 aaPredicted RBP14.4□□□□□ -0.1
SMAD1-215ENST00000515385 FOXN1O15353 648 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 ANXA1P04083 346 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 EPHB4P54760 987 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 KRT83P78385 493 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 IFFO1Q0D2I5 559 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 SNCBQ16143 134 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 IMMTQ16891 758 aaKnown RBP14.4□□□□□ -0.1
SMAD1-215ENST00000515385 KDM7AQ6ZMT4 941 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 C3orf20Q8ND61 904 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 CAGE1Q8TC20 777 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 EHD4Q9H223 541 aa14.4□□□□□ -0.1
SMAD1-215ENST00000515385 LRRC10BA6NIK2 292 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 NDUFA10O95299 355 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 PTPREP23469 700 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 SLC8A1P32418 973 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 TFCP2Q12800 502 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 SND1Q7KZF4 910 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMAD1-215ENST00000515385 C1orf131Q8NDD1 294 aaKnown RBP14.39□□□□□ -0.11
SMAD1-215ENST00000515385 CAVIN3Q969G5 261 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 JAKMIP2Q96AA8 810 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 SLF1Q9BQI6 1058 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
SMAD1-215ENST00000515385 PAG1Q9NWQ8 432 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 LIMA1Q9UHB6 759 aaKnown RBP14.39□□□□□ -0.11
SMAD1-215ENST00000515385 SERTAD1Q9UHV2 236 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 GUCA1BQ9UMX6 200 aa14.39□□□□□ -0.11
SMAD1-215ENST00000515385 BTBD11A6QL63 1104 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 RNF113AO15541 343 aaKnown RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 TNFRSF8P28908 595 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 HOXC9P31274 260 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 SARNPP82979 210 aaKnown RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 BIRC2Q13490 618 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 CUL4BQ13620 913 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 MB21D2Q8IYB1 491 aaPredicted RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 NCOA7Q8NI08 942 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 POLR2DO15514 142 aaKnown RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 KRT86O43790 486 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 NEBLO76041 1014 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 ABL1P00519 1130 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 ATP1A1P05023 1023 aaKnown RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 SLC8A3P57103 927 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 NEXNQ0ZGT2 675 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 WASHC4Q2M389 1173 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 NAA35Q5VZE5 725 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 FNBP4Q8N3X1 1017 aaPredicted RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 NUP88Q99567 741 aaPredicted RBP14.38□□□□□ -0.11
SMAD1-215ENST00000515385 DBNDD2Q9BQY9 259 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 ATP6V0A4Q9HBG4 840 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 CPDO75976 1380 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 PLEKHG1Q9ULL1 1385 aa14.38□□□□□ -0.11
SMAD1-215ENST00000515385 MYBL2P10244 700 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 RALYLQ86SE5 291 aaKnown RBP14.37□□□□□ -0.11
SMAD1-215ENST00000515385 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 ZNF473Q8WTR7 871 aaKnown RBP14.37□□□□□ -0.11
SMAD1-215ENST00000515385 SLC40A1Q9NP59 571 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 GJB4Q9NTQ9 266 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 CEP131Q9UPN4 1083 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 MAST3O60307 1309 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 ACTN4O43707 911 aaKnown RBP14.37□□□□□ -0.11
SMAD1-215ENST00000515385 LSP1P33241 339 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 KRT9P35527 623 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 RFX5P48382 616 aaPredicted RBP14.37□□□□□ -0.11
SMAD1-215ENST00000515385 PDCLQ13371 301 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 RNF187Q5TA31 235 aaPredicted RBP14.37□□□□□ -0.11
SMAD1-215ENST00000515385 PARP9Q8IXQ6 854 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 GDAP1L1Q96MZ0 367 aa14.37□□□□□ -0.11
SMAD1-215ENST00000515385 FBXO2Q9UK22 296 aaPredicted RBP14.37□□□□□ -0.11
SMAD1-215ENST00000515385 CHGBP05060 677 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
SMAD1-215ENST00000515385 TSR1Q2NL82 804 aaKnown RBP14.36□□□□□ -0.11
SMAD1-215ENST00000515385 TTMPQ5BVD1 217 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 CCDC122Q5T0U0 273 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 STK11IPQ8N1F8 1099 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 KLHDC4Q8TBB5 520 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 WASF1Q92558 559 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 CALR3Q96L12 384 aaKnown RBP14.36□□□□□ -0.11
SMAD1-215ENST00000515385 GSDMAQ96QA5 445 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 GPR108Q9NPR9 543 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 BATF3Q9NR55 127 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 HEG1Q9ULI3 1381 aa14.36□□□□□ -0.11
SMAD1-215ENST00000515385 N4BP3O15049 544 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 RTN2O75298 545 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 PRLRP16471 622 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 CLNS1AP54105 237 aaKnown RBP14.35□□□□□ -0.11
SMAD1-215ENST00000515385 PTGISQ16647 500 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 RILPL1Q5EBL4 403 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 RCSD1Q6JBY9 416 aa14.35□□□□□ -0.11
SMAD1-215ENST00000515385 CCDC121Q6ZUS5 278 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms