RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 CHGBP05060 677 aa19.78■□□□□ 0.76
TNFRSF25-220ENST00000515145 USP14P54578 494 aa19.78■□□□□ 0.76
TNFRSF25-220ENST00000515145 POTEEQ6S8J3 1075 aa19.78■□□□□ 0.76
TNFRSF25-220ENST00000515145 GPRC5AQ8NFJ5 357 aa19.78■□□□□ 0.76
TNFRSF25-220ENST00000515145 GTF3C2Q8WUA4 911 aaPredicted RBP19.78■□□□□ 0.76
TNFRSF25-220ENST00000515145 RBPJLQ9UBG7 517 aa19.78■□□□□ 0.76
TNFRSF25-220ENST00000515145 BAZ2AQ9UIF9 1905 aaKnown RBP19.77■□□□□ 0.76
TNFRSF25-220ENST00000515145 VCAM1P19320 739 aa19.77■□□□□ 0.76
TNFRSF25-220ENST00000515145 ERVK-9P63128 1117 aa19.77■□□□□ 0.76
TNFRSF25-220ENST00000515145 ERVK-24P63145 666 aa19.77■□□□□ 0.76
TNFRSF25-220ENST00000515145 UBE3CQ15386 1083 aa19.77■□□□□ 0.76
TNFRSF25-220ENST00000515145 SLC44A5Q8NCS7 719 aa19.77■□□□□ 0.76
TNFRSF25-220ENST00000515145 PAK6Q9NQU5 681 aaPredicted RBP19.77■□□□□ 0.76
TNFRSF25-220ENST00000515145 USP17L15C9J2P7 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L13C9JLJ4 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L11C9JVI0 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L18D6R9N7 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L22D6RA61 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L17D6RBQ6 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L19D6RCP7 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L20D6RJB6 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 SGPL1O95470 568 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 HMGCRP04035 888 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L24Q0WX57 530 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 SEPT2Q15019 361 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 PAGR1Q9BTK6 254 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 DCTPP1Q9H773 170 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 ATP8A2Q9NTI2 1148 aa19.76■□□□□ 0.75
TNFRSF25-220ENST00000515145 MYH8P13535 1937 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 FARP2O94887 1054 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 FXR1P51114 621 aaKnown RBP eCLIP19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 Q3C1V9 767 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 SOCS4Q8WXH5 440 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 DYNLL2Q96FJ2 89 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 DEFB118Q96PH6 123 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 PORCNQ9H237 461 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 ECHDC1Q9NTX5 307 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 SWAP70Q9UH65 585 aa19.75■□□□□ 0.75
TNFRSF25-220ENST00000515145 CNMDO75829 334 aa19.74■□□□□ 0.75
TNFRSF25-220ENST00000515145 MAPK4P31152 587 aa19.74■□□□□ 0.75
TNFRSF25-220ENST00000515145 CATSPERGQ6ZRH7 1159 aa19.74■□□□□ 0.75
TNFRSF25-220ENST00000515145 TRIB2Q92519 343 aa19.74■□□□□ 0.75
TNFRSF25-220ENST00000515145 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.74■□□□□ 0.75
TNFRSF25-220ENST00000515145 CYP2D7A0A087X1C5 515 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 A0A1W2PRG0 241 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 SMIM22K7EJ46 135 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 MPHOSPH10O00566 681 aaKnown RBP19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 TRIM32Q13049 653 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 ZSCAN25Q6NSZ9 544 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 NUDT12Q9BQG2 462 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 CRISPLD2Q9H0B8 497 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 PUS7LQ9H0K6 701 aaKnown RBP19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 RABGAP1Q9Y3P9 1069 aa19.73■□□□□ 0.75
TNFRSF25-220ENST00000515145 CYP2B6P20813 491 aa19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 C12orf60Q5U649 245 aa19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 TSHZ3Q63HK5 1081 aa19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 LBX2Q6XYB7 198 aa19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 TMEM179Q6ZVK1 233 aa19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 GPR142Q7Z601 462 aa19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP6NLQ92738 828 aa19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 RPAP3Q9H6T3 665 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF25-220ENST00000515145 TRIOBPQ9H2D6 2365 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 SPDYE16A6NNV3 312 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 H0YGN5 161 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 XRCC5P13010 732 aaKnown RBP19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 AKR1B1P15121 316 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 CAPN2P17655 700 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 MORN1Q5T089 497 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 PLEKHH3Q7Z736 793 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 CLEC10AQ8IUN9 316 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 HTATIP2Q9BUP3 242 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 PCDHB15Q9Y5E8 787 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 SLC4A4Q9Y6R1 1079 aa19.71■□□□□ 0.75
TNFRSF25-220ENST00000515145 USP17L12C9JPN9 530 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 USP17L21D6R901 530 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 TFRCP02786 760 aaKnown RBP19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 CDK8P49336 464 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 MAP3K21Q5TCX8 1036 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 C16orf86Q6ZW13 317 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 CCAR1Q8IX12 1150 aaKnown RBP19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 KBTBD3Q8NAB2 608 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 GPATCH3Q96I76 525 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 A0A0G2JMZ2 1700 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 RPTORQ8N122 1335 aa19.7■□□□□ 0.74
TNFRSF25-220ENST00000515145 RLFQ13129 1914 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 RGS2P41220 211 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 RRP1P56182 461 aaKnown RBP19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 CCNA1P78396 465 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 ICA1Q05084 483 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 AMOTL1Q8IY63 956 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 DPF3Q92784 378 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 DDRGK1Q96HY6 314 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 APBA2Q99767 749 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 HMX1Q9NP08 348 aaPredicted RBP19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 BTBD7Q9P203 1132 aa19.69■□□□□ 0.74
TNFRSF25-220ENST00000515145 PRKAR2AP13861 404 aaKnown RBP19.68■□□□□ 0.74
TNFRSF25-220ENST00000515145 ZKSCAN1P17029 563 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF25-220ENST00000515145 KIAA1755Q5JYT7 1200 aa19.68■□□□□ 0.74
TNFRSF25-220ENST00000515145 CTR9Q6PD62 1173 aa19.68■□□□□ 0.74
TNFRSF25-220ENST00000515145 SIAH1Q8IUQ4 282 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms