RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 DCAF17Q5H9S7 520 aaPredicted RBP8.67□□□□□ -1.02
CLCN3-209ENST00000513761 SV2BQ7L1I2 683 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 DYMQ7RTS9 669 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 SIRT1Q96EB6 747 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 NUP58Q9BVL2 599 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 CC2D1AQ6P1N0 951 aaPredicted RBP8.66□□□□□ -1.02
CLCN3-209ENST00000513761 RRAGAQ7L523 313 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
CLCN3-209ENST00000513761 NLRC4Q9NPP4 1024 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 SAMD15Q9P1V8 674 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 NIP7Q9Y221 180 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLCN3-209ENST00000513761 PPP6R2O75170 966 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 NCAPH2Q6IBW4 605 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 KLHL34Q8N239 644 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 TRIML1Q8N9V2 468 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 UIMC1Q96RL1 719 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 ORAI2Q96SN7 254 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 SAMM50Q9Y512 469 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 PUM3Q15397 648 aaKnown RBP8.66□□□□□ -1.02
CLCN3-209ENST00000513761 E2F4Q16254 413 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 ARMCX5Q6P1M9 558 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 KCNK9Q9NPC2 374 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 RASAL2Q9UJF2 1139 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 CEP104O60308 925 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
CLCN3-209ENST00000513761 ARHGAP25P42331 645 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 IRX5P78411 483 aaPredicted RBP8.66□□□□□ -1.02
CLCN3-209ENST00000513761 CETN1Q12798 172 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 PAK2Q13177 524 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 CASP8Q14790 479 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 APOA5Q6Q788 366 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 LMBR1Q8WVP7 490 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 OSBP2Q969R2 916 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 TXKP42681 527 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 FMR1NBQ8N0W7 255 aaPredicted RBP8.66□□□□□ -1.02
CLCN3-209ENST00000513761 TBC1D5Q92609 795 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 HAUS4Q9H6D7 363 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 CROCC2H7BZ55 1655 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 IQSEC2Q5JU85 1478 aa8.66□□□□□ -1.02
CLCN3-209ENST00000513761 BUB1O43683 1085 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 CFAP221Q4G0U5 840 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 PNMA8AQ86V59 439 aaPredicted RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 OSBPL5Q9H0X9 879 aaPredicted RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 EXOC5O00471 708 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 COPB1P53618 953 aaKnown RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 CLNS1AP54105 237 aaKnown RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 NR5A1Q13285 461 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 SPATA5Q8NB90 893 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 RPGRIP1Q96KN7 1286 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 CTIFO43310 598 aaKnown RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 CNNM4Q6P4Q7 775 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 CCZ1BP86790 482 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 CCZ1P86791 482 aaPredicted RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 PTPN12Q05209 780 aaKnown RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 IFNL3Q8IZI9 196 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 FANCBQ8NB91 859 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 RRP36Q96EU6 259 aaKnown RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 RSRC1Q96IZ7 334 aaKnown RBP8.65□□□□□ -1.02
CLCN3-209ENST00000513761 TBC1D7Q9P0N9 293 aa8.65□□□□□ -1.02
CLCN3-209ENST00000513761 CEP85LQ5SZL2 805 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 E4F1Q66K89 784 aaPredicted RBP8.65□□□□□ -1.03
CLCN3-209ENST00000513761 FBF1Q8TES7 1133 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 PNPLA6Q8IY17 1366 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 UNC13BO14795 1591 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 PDE6AP16499 860 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 IQCB1Q15051 598 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC6Q16204 474 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 SLC9C1Q4G0N8 1177 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 TBX22Q9Y458 520 aa8.65□□□□□ -1.03
CLCN3-209ENST00000513761 AP5Z1O43299 807 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 LDHCP07864 332 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 POTEJP0CG39 1038 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 PTGDRQ13258 359 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 FAM47AQ5JRC9 791 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 TRIM58Q8NG06 486 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 SHROOM2Q13796 1616 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 GNA11P29992 359 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 GRIPAP1Q4V328 841 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC26Q8TAB7 109 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 MRPS25P82663 173 aaKnown RBP8.64□□□□□ -1.03
CLCN3-209ENST00000513761 SDR42E1Q8WUS8 393 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 CUL5Q93034 780 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 PUS7LQ9H0K6 701 aaKnown RBP8.64□□□□□ -1.03
CLCN3-209ENST00000513761 A0A1B0GUA9 196 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 A6NNZ2 444 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 LTKP29376 864 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 TUBB8Q3ZCM7 444 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 EPHA10Q5JZY3 1008 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 ATP10DQ9P241 1426 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 BAIAP2L1Q9UHR4 511 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 JRKLQ9Y4A0 524 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 BUB1BO60566 1050 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-209ENST00000513761 CTNNA2P26232 953 aa8.64□□□□□ -1.03
CLCN3-209ENST00000513761 ERCC5P28715 1186 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-209ENST00000513761 GJC1P36383 396 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms