RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 CYB5R4Q7L1T6 521 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 CHST3Q7LGC8 479 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 TMC6Q7Z403 805 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 KRT222Q8N1A0 295 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 C17orf53Q8N3J3 647 aaPredicted RBP9.23□□□□□ -0.93
DDR1-273ENST00000513514 IQCDQ96DY2 449 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 PPP1R13BQ96KQ4 1090 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 FTOQ9C0B1 505 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDR1-273ENST00000513514 SH3GLB2Q9NR46 395 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 CCDC87Q9NVE4 849 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 FAM53CQ9NYF3 392 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 MYO1AQ9UBC5 1043 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 ITGB4P16144 1822 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 ITIH6Q6UXX5 1313 aa9.23□□□□□ -0.93
DDR1-273ENST00000513514 LAMB2P55268 1798 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 TRIM75PA6NK02 468 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 KIF28PB7ZC32 967 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 ORC4O43929 436 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 CHGBP05060 677 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 ZNF18P17022 549 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 ZSCAN20P17040 1043 aaPredicted RBP9.22□□□□□ -0.93
DDR1-273ENST00000513514 HMGB2P26583 209 aaKnown RBP9.22□□□□□ -0.93
DDR1-273ENST00000513514 CALML3P27482 149 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 CDC27P30260 824 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 PHKA1P46020 1223 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 TDO2P48775 406 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 GNAQP50148 359 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 PLCD1P51178 756 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 FSTL1Q12841 308 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 TBX2Q13207 712 aaPredicted RBP9.22□□□□□ -0.93
DDR1-273ENST00000513514 SF3B3Q15393 1217 aaKnown RBP9.22□□□□□ -0.93
DDR1-273ENST00000513514 CAVIN4Q5BKX8 364 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 ARMCX5Q6P1M9 558 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 CATIPQ7Z7H3 387 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 MICU3Q86XE3 530 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 DIS3L2Q8IYB7 885 aaKnown RBP9.22□□□□□ -0.93
DDR1-273ENST00000513514 MAGEB6Q8N7X4 407 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 ANKRD20A12PQ8NF67 263 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 SLC26A6Q9BXS9 759 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 RRAGCQ9HB90 399 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 ATP8A2Q9NTI2 1148 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 RMND1Q9NWS8 449 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 FBXO2Q9UK22 296 aaPredicted RBP9.22□□□□□ -0.93
DDR1-273ENST00000513514 PCDHA5Q9Y5H7 936 aa9.22□□□□□ -0.93
DDR1-273ENST00000513514 TNRC6CQ9HCJ0 1690 aaKnown RBP9.22□□□□□ -0.93
DDR1-273ENST00000513514 NUP98P52948 1817 aa9.21□□□□□ -0.93
DDR1-273ENST00000513514 LOC102724428A0A0B4J2F2 783 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 LRRC10BA6NIK2 292 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 LAD1O00515 517 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 MBD4O95243 580 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 CDK11BP21127 795 aaKnown RBP9.21□□□□□ -0.94
DDR1-273ENST00000513514 KIF5BP33176 963 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 KRT2P35908 639 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 SIK1P57059 783 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 PPARAQ07869 468 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 ORC2Q13416 577 aaPredicted RBP9.21□□□□□ -0.94
DDR1-273ENST00000513514 RASGRF1Q13972 1273 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 HLFQ16534 295 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 LONRF3Q496Y0 759 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 SBK1Q52WX2 424 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 SLC10A5Q5PT55 438 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 SPATA1Q5VX52 437 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 METTL16Q86W50 562 aaKnown RBP9.21□□□□□ -0.94
DDR1-273ENST00000513514 HOMER1Q86YM7 354 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 ZNF654Q8IZM8 581 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 MPNDQ8N594 471 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 MAGEF1Q9HAY2 307 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 BSDC1Q9NW68 430 aaPredicted RBP9.21□□□□□ -0.94
DDR1-273ENST00000513514 RNF181Q9P0P0 153 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 LRP2BPQ9P2M1 347 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.21□□□□□ -0.94
DDR1-273ENST00000513514 SLC4A4Q9Y6R1 1079 aa9.21□□□□□ -0.94
DDR1-273ENST00000513514 BCORQ6W2J9 1755 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 MAGEB6P1A0A0J9YX57 407 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 RANBP6O60518 1105 aaKnown RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 H2AFXP16104 143 aaPredicted RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 KCNA3P22001 575 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 FECHP22830 423 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 MARCKSP29966 332 aaPredicted RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 RASSF7Q02833 373 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 SEC23AQ15436 765 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 SPTY2D1Q68D10 685 aaPredicted RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 CNGA4Q8IV77 575 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 GPR161Q8N6U8 529 aaKnown RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 IQUBQ8NA54 791 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 UBXN4Q92575 508 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 BAG1Q99933 345 aaPredicted RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 LZTS2Q9BRK4 669 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 PHF20Q9BVI0 1012 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 NYXQ9GZU5 481 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 ANKRD2Q9GZV1 360 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 HSD3B7Q9H2F3 369 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 CUEDC2Q9H467 287 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 ZNF215Q9UL58 517 aaPredicted RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 ZBTB1Q9Y2K1 713 aa9.2□□□□□ -0.94
DDR1-273ENST00000513514 V9GYY5 206 aaPredicted RBP9.2□□□□□ -0.94
DDR1-273ENST00000513514 A0A1B0GTH6 734 aa9.19□□□□□ -0.94
DDR1-273ENST00000513514 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms