RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 DEFB118Q96PH6 123 aa10.23□□□□□ -0.77
SDHC-208ENST00000513009 IDI2Q9BXS1 227 aa10.23□□□□□ -0.77
SDHC-208ENST00000513009 USP40Q9NVE5 1235 aa10.23□□□□□ -0.77
SDHC-208ENST00000513009 LOC285556D6RIA3 1793 aa10.22□□□□□ -0.77
SDHC-208ENST00000513009 CTNND1O60716 968 aaKnown RBP10.22□□□□□ -0.77
SDHC-208ENST00000513009 GNAI2P04899 355 aa10.22□□□□□ -0.77
SDHC-208ENST00000513009 RGS3P49796 1198 aa10.22□□□□□ -0.77
SDHC-208ENST00000513009 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
SDHC-208ENST00000513009 SMCR8Q8TEV9 937 aaPredicted RBP10.22□□□□□ -0.77
SDHC-208ENST00000513009 GDF15Q99988 308 aa10.22□□□□□ -0.77
SDHC-208ENST00000513009 GNL3LQ9NVN8 582 aaKnown RBP10.22□□□□□ -0.77
SDHC-208ENST00000513009 STAP2Q9UGK3 403 aa10.22□□□□□ -0.77
SDHC-208ENST00000513009 GAKO14976 1311 aa10.22□□□□□ -0.77
SDHC-208ENST00000513009 RANBP2P49792 3224 aaKnown RBP10.21□□□□□ -0.77
SDHC-208ENST00000513009 TRIM27P14373 513 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 SLC4A3P48751 1232 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 FAM110CQ1W6H9 321 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 GADL1Q6ZQY3 521 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 ATG9AQ7Z3C6 839 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 NECAB2Q7Z6G3 386 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 ZGPATQ8N5A5 531 aaKnown RBP10.21□□□□□ -0.77
SDHC-208ENST00000513009 COA7Q96BR5 231 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
SDHC-208ENST00000513009 CEP126Q9P2H0 1117 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 DENND2AQ9ULE3 1009 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 AGTPBP1Q9UPW5 1226 aa10.21□□□□□ -0.77
SDHC-208ENST00000513009 LRRFIP2Q9Y608 721 aaKnown RBP10.21□□□□□ -0.77
SDHC-208ENST00000513009 CIAO1O76071 339 aa10.2□□□□□ -0.78
SDHC-208ENST00000513009 ATP2B3Q16720 1220 aa10.2□□□□□ -0.78
SDHC-208ENST00000513009 DDX60LQ5H9U9 1706 aaKnown RBP10.2□□□□□ -0.78
SDHC-208ENST00000513009 ATAD5Q96QE3 1844 aa10.2□□□□□ -0.78
SDHC-208ENST00000513009 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.2□□□□□ -0.78
SDHC-208ENST00000513009 RCAN3Q9UKA8 241 aa10.2□□□□□ -0.78
SDHC-208ENST00000513009 PLXNB2O15031 1838 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 PDS5AQ29RF7 1337 aaKnown RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 DDTLA6NHG4 134 aaPredicted RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 TRIM75PA6NK02 468 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 SRGAP3O43295 1099 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 HMGCRP04035 888 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 IL15P40933 162 aaPredicted RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 GCLCP48506 637 aaPredicted RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 G3BP1Q13283 466 aaKnown RBP eCLIP10.19□□□□□ -0.78
SDHC-208ENST00000513009 OS9Q13438 667 aaPredicted RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 LRIT3Q3SXY7 679 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 ZSCAN29Q8IWY8 852 aaPredicted RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 ANKRD13CQ8N6S4 541 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 PROCA1Q8NCQ7 364 aaPredicted RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 DIS3LQ8TF46 1054 aaKnown RBP10.19□□□□□ -0.78
SDHC-208ENST00000513009 PHOX2BQ99453 314 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 AKAP2Q9Y2D5 859 aa10.19□□□□□ -0.78
SDHC-208ENST00000513009 COL2A1P02458 1487 aaPredicted RBP10.18□□□□□ -0.78
SDHC-208ENST00000513009 RPTORQ8N122 1335 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 PHKA1P46020 1223 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 COPS2P61201 443 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 TREML2Q5T2D2 321 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 GORABQ5T7V8 394 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 YTHDC1Q96MU7 727 aaKnown RBP10.18□□□□□ -0.78
SDHC-208ENST00000513009 MEIS3Q99687 375 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 PRR14Q9BWN1 585 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 SIL1Q9H173 461 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 DDX4Q9NQI0 724 aaKnown RBP10.18□□□□□ -0.78
SDHC-208ENST00000513009 GJD2Q9UKL4 321 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 STXBP5LQ9Y2K9 1186 aa10.18□□□□□ -0.78
SDHC-208ENST00000513009 ACTN4O43707 911 aaKnown RBP10.17□□□□□ -0.78
SDHC-208ENST00000513009 PABPC4Q13310 644 aaKnown RBP eCLIP10.17□□□□□ -0.78
SDHC-208ENST00000513009 CCDC102BQ68D86 513 aa10.17□□□□□ -0.78
SDHC-208ENST00000513009 PPP1R18Q6NYC8 613 aa10.17□□□□□ -0.78
SDHC-208ENST00000513009 DZIP1Q86YF9 867 aaKnown RBP10.17□□□□□ -0.78
SDHC-208ENST00000513009 C7orf61Q8IZ16 206 aa10.17□□□□□ -0.78
SDHC-208ENST00000513009 TMEM57Q8N5G2 664 aa10.17□□□□□ -0.78
SDHC-208ENST00000513009 OSBPL5Q9H0X9 879 aaPredicted RBP10.17□□□□□ -0.78
SDHC-208ENST00000513009 HMX1Q9NP08 348 aaPredicted RBP10.17□□□□□ -0.78
SDHC-208ENST00000513009 OGDHLQ9ULD0 1010 aa10.17□□□□□ -0.78
SDHC-208ENST00000513009 MROH7-TTC4A0A0A0MT08 1334 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 GPR75-ASB3A0A0A6YYF3 556 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 MAP4K4O95819 1239 aaPredicted RBP10.16□□□□□ -0.78
SDHC-208ENST00000513009 SLURP2P0DP57 97 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 BTDP43251 543 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 MAGEA10P43363 369 aaPredicted RBP10.16□□□□□ -0.78
SDHC-208ENST00000513009 RHBDL3P58872 404 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 SPP2Q13103 211 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 RASGRF1Q13972 1273 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 SH3D19Q5HYK7 790 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 MAP3K21Q5TCX8 1036 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 SPTY2D1Q68D10 685 aaPredicted RBP10.16□□□□□ -0.78
SDHC-208ENST00000513009 BLOC1S3Q6QNY0 202 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 CCDC84Q86UT8 332 aaPredicted RBP10.16□□□□□ -0.78
SDHC-208ENST00000513009 TDHQ8IZJ6 230 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 DEFB123Q8N688 67 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 ZNF280CQ8ND82 737 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 C11orf49Q9H6J7 331 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.16□□□□□ -0.78
SDHC-208ENST00000513009 MORF4L1Q9UBU8 362 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 ZMYND8Q9ULU4 1186 aaPredicted RBP10.16□□□□□ -0.78
SDHC-208ENST00000513009 DDX19BQ9UMR2 479 aa10.16□□□□□ -0.78
SDHC-208ENST00000513009 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms