RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 ZNF341Q9BYN7 854 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 GH2P01242 217 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 CCT2P78371 535 aaKnown RBP12.25□□□□□ -0.45
LINC01550-203ENST00000512901 ATP2B2Q01814 1243 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 PPP4R3BQ5MIZ7 849 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 USP48Q86UV5 1035 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 NUP133Q8WUM0 1156 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 PFKFB2O60825 505 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC01550-203ENST00000512901 SEPT2Q15019 361 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 GTF3C6Q969F1 213 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 CHMP4CQ96CF2 233 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC01550-203ENST00000512901 NMRK2Q9NPI5 230 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 MTMR4Q9NYA4 1195 aa12.24□□□□□ -0.45
LINC01550-203ENST00000512901 GREB1LQ9C091 1923 aaPredicted RBP12.24□□□□□ -0.45
LINC01550-203ENST00000512901 IGKV6D-41A0A0C4DH26 115 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 TTLL1O95922 423 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 RXRAP19793 462 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 NF2P35240 595 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CUL4AQ13619 759 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 RRP1BQ14684 758 aaKnown RBP12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CLEC10AQ8IUN9 316 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 TMEM47Q9BQJ4 181 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 GLIS2Q9BZE0 524 aaPredicted RBP12.23□□□□□ -0.45
LINC01550-203ENST00000512901 KANSL2Q9H9L4 492 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CLIP2Q9UDT6 1046 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
LINC01550-203ENST00000512901 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CALM1P0DP23 149 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CALM2P0DP24 149 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CALM3P0DP25 149 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 TOP1P11387 765 aaKnown RBP12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CAP2P40123 477 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 ICA1Q05084 483 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 SCRN1Q12765 414 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 PRKG1Q13976 671 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 SHROOM1Q2M3G4 852 aaPredicted RBP12.23□□□□□ -0.45
LINC01550-203ENST00000512901 DLK2Q6UY11 383 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 CDCA5Q96FF9 252 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 NCOA5Q9HCD5 579 aaKnown RBP12.23□□□□□ -0.45
LINC01550-203ENST00000512901 ZBTB21Q9ULJ3 1066 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
LINC01550-203ENST00000512901 ATAD5Q96QE3 1844 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 CPLX1O14810 134 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 DHX16O60231 1041 aaKnown RBP12.22□□□□□ -0.45
LINC01550-203ENST00000512901 DDAH1O94760 285 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 ASNSP08243 561 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 MAP1SQ66K74 1059 aaPredicted RBP12.22□□□□□ -0.45
LINC01550-203ENST00000512901 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
LINC01550-203ENST00000512901 WRNIP1Q96S55 665 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 PHF20L1A8MW92 1017 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
LINC01550-203ENST00000512901 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 RCAN1P53805 252 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 JAG1P78504 1218 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 RTN1Q16799 776 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
LINC01550-203ENST00000512901 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 SMC3Q9UQE7 1217 aa12.22□□□□□ -0.45
LINC01550-203ENST00000512901 SSC5DA1L4H1 1573 aa12.21□□□□□ -0.45
LINC01550-203ENST00000512901 PPP1R12BO60237 982 aaPredicted RBP12.21□□□□□ -0.45
LINC01550-203ENST00000512901 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
LINC01550-203ENST00000512901 NOVP48745 357 aa12.21□□□□□ -0.45
LINC01550-203ENST00000512901 ST3GAL1Q11201 340 aa12.21□□□□□ -0.45
LINC01550-203ENST00000512901 CPLX2Q6PUV4 134 aaKnown RBP12.21□□□□□ -0.45
LINC01550-203ENST00000512901 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
LINC01550-203ENST00000512901 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
LINC01550-203ENST00000512901 NYAP2Q9P242 653 aa12.21□□□□□ -0.45
LINC01550-203ENST00000512901 CCDC196A0A1B0GTZ2 297 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 RAD21O60216 631 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 INPP5BP32019 993 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 TROAPQ12815 778 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
LINC01550-203ENST00000512901 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 GINM1Q9NU53 330 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 DOCK1Q14185 1865 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 KIF5BP33176 963 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 PPP2R5BQ15173 497 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 RBM28Q9NW13 759 aaKnown RBP12.2□□□□□ -0.46
LINC01550-203ENST00000512901 ZNF112Q9UJU3 913 aa12.2□□□□□ -0.46
LINC01550-203ENST00000512901 USP2O75604 605 aaPredicted RBP12.19□□□□□ -0.46
LINC01550-203ENST00000512901 CDKL5O76039 1030 aa12.19□□□□□ -0.46
LINC01550-203ENST00000512901 CDC27P30260 824 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms