RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 CABP5Q9NP86 173 aa20.3■□□□□ 0.84
MATR3-220ENST00000512876 HMGCRP04035 888 aa20.29■□□□□ 0.84
MATR3-220ENST00000512876 CAPN2P17655 700 aa20.29■□□□□ 0.84
MATR3-220ENST00000512876 VCAM1P19320 739 aa20.29■□□□□ 0.84
MATR3-220ENST00000512876 ERVK-9P63128 1117 aa20.29■□□□□ 0.84
MATR3-220ENST00000512876 ERVK-24P63145 666 aa20.29■□□□□ 0.84
MATR3-220ENST00000512876 BCL11AQ9H165 835 aa20.29■□□□□ 0.84
MATR3-220ENST00000512876 MYH7P12883 1935 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L15C9J2P7 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L13C9JLJ4 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L11C9JVI0 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L18D6R9N7 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L22D6RA61 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L17D6RBQ6 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L19D6RCP7 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L20D6RJB6 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 PRKAB2O43741 272 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 SMARCA5O60264 1052 aaPredicted RBP20.28■□□□□ 0.84
MATR3-220ENST00000512876 CHGBP05060 677 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 CYP2D6P10635 497 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 USP17L24Q0WX57 530 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 ZYXQ15942 572 aaKnown RBP20.28■□□□□ 0.84
MATR3-220ENST00000512876 LBX2Q6XYB7 198 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 SOCS4Q8WXH5 440 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 CRISPLD2Q9H0B8 497 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 PORCNQ9H237 461 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 ATP8A2Q9NTI2 1148 aa20.28■□□□□ 0.84
MATR3-220ENST00000512876 CNMDO75829 334 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.84
MATR3-220ENST00000512876 MAPK4P31152 587 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 SEPT2Q15019 361 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 Q3C1V9 767 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 CATSPERGQ6ZRH7 1159 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 SLC44A5Q8NCS7 719 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 USP6NLQ92738 828 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 DEFB118Q96PH6 123 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 SWAP70Q9UH65 585 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 RABGAP1Q9Y3P9 1069 aa20.27■□□□□ 0.84
MATR3-220ENST00000512876 TRIOBPQ9H2D6 2365 aa20.27■□□□□ 0.83
MATR3-220ENST00000512876 XRCC5P13010 732 aaKnown RBP20.26■□□□□ 0.83
MATR3-220ENST00000512876 HABP4Q5JVS0 413 aaKnown RBP20.26■□□□□ 0.83
MATR3-220ENST00000512876 TRIB2Q92519 343 aa20.26■□□□□ 0.83
MATR3-220ENST00000512876 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
MATR3-220ENST00000512876 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.26■□□□□ 0.832e-11■■■□□ 18.4
MATR3-220ENST00000512876 ECHDC1Q9NTX5 307 aa20.26■□□□□ 0.83
MATR3-220ENST00000512876 A0A1W2PRG0 241 aa20.25■□□□□ 0.83
MATR3-220ENST00000512876 MORN1Q5T089 497 aa20.25■□□□□ 0.83
MATR3-220ENST00000512876 MAP3K21Q5TCX8 1036 aa20.25■□□□□ 0.83
MATR3-220ENST00000512876 TMEM179Q6ZVK1 233 aa20.25■□□□□ 0.83
MATR3-220ENST00000512876 GPR142Q7Z601 462 aa20.25■□□□□ 0.83
MATR3-220ENST00000512876 DYNLL2Q96FJ2 89 aa20.25■□□□□ 0.83
MATR3-220ENST00000512876 NUDT12Q9BQG2 462 aa20.25■□□□□ 0.83
MATR3-220ENST00000512876 BAZ2AQ9UIF9 1905 aaKnown RBP20.24■□□□□ 0.83
MATR3-220ENST00000512876 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
MATR3-220ENST00000512876 H0YGN5 161 aa20.24■□□□□ 0.83
MATR3-220ENST00000512876 TRIM32Q13049 653 aa20.24■□□□□ 0.83
MATR3-220ENST00000512876 C12orf60Q5U649 245 aa20.24■□□□□ 0.83
MATR3-220ENST00000512876 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
MATR3-220ENST00000512876 HTATIP2Q9BUP3 242 aa20.24■□□□□ 0.83
MATR3-220ENST00000512876 PUS7LQ9H0K6 701 aaKnown RBP20.24■□□□□ 0.83
MATR3-220ENST00000512876 RPAP3Q9H6T3 665 aaPredicted RBP20.24■□□□□ 0.83
MATR3-220ENST00000512876 RPTORQ8N122 1335 aa20.24■□□□□ 0.83
MATR3-220ENST00000512876 SMIM22K7EJ46 135 aa20.23■□□□□ 0.83
MATR3-220ENST00000512876 CYP2B6P20813 491 aa20.23■□□□□ 0.83
MATR3-220ENST00000512876 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 CYP2D7A0A087X1C5 515 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 USP17L12C9JPN9 530 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 USP17L21D6R901 530 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 MPHOSPH10O00566 681 aaKnown RBP20.22■□□□□ 0.83
MATR3-220ENST00000512876 AKR1B1P15121 316 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 C16orf86Q6ZW13 317 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 PLEKHH3Q7Z736 793 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 KBTBD3Q8NAB2 608 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 BTBD7Q9P203 1132 aa20.22■□□□□ 0.83
MATR3-220ENST00000512876 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
MATR3-220ENST00000512876 RGS2P41220 211 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 CCNA1P78396 465 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 SIAH1Q8IUQ4 282 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
MATR3-220ENST00000512876 CCDC17Q96LX7 622 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 APBA2Q99767 749 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 HMX1Q9NP08 348 aaPredicted RBP20.21■□□□□ 0.83
MATR3-220ENST00000512876 PCDHB15Q9Y5E8 787 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 SLC4A4Q9Y6R1 1079 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 MYH8P13535 1937 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 RLFQ13129 1914 aa20.21■□□□□ 0.83
MATR3-220ENST00000512876 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
MATR3-220ENST00000512876 CDK8P49336 464 aa20.2■□□□□ 0.82
MATR3-220ENST00000512876 KIAA1755Q5JYT7 1200 aa20.2■□□□□ 0.82
MATR3-220ENST00000512876 CLEC10AQ8IUN9 316 aa20.2■□□□□ 0.82
MATR3-220ENST00000512876 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
MATR3-220ENST00000512876 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
MATR3-220ENST00000512876 DPF3Q92784 378 aa20.2■□□□□ 0.82
MATR3-220ENST00000512876 GPATCH3Q96I76 525 aa20.2■□□□□ 0.82
MATR3-220ENST00000512876 COLQQ9Y215 455 aaPredicted RBP20.2■□□□□ 0.82
MATR3-220ENST00000512876 TMX2Q9Y320 296 aa20.2■□□□□ 0.82
MATR3-220ENST00000512876 ZKSCAN1P17029 563 aaPredicted RBP20.19■□□□□ 0.82
MATR3-220ENST00000512876 ICA1Q05084 483 aa20.19■□□□□ 0.82
MATR3-220ENST00000512876 TSHZ3Q63HK5 1081 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms