RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 IRF7Q92985 503 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 HOOK2Q96ED9 719 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 ARHGAP9Q9BRR9 750 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 HDAC5Q9UQL6 1122 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 SUGT1Q9Y2Z0 365 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 PCDHAC2Q9Y5I4 1007 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 USP2O75604 605 aaPredicted RBP8.97□□□□□ -0.97
USP46-208ENST00000512656 IFIT1P09914 478 aaKnown RBP8.97□□□□□ -0.97
USP46-208ENST00000512656 CHAF1AQ13111 956 aaPredicted RBP8.97□□□□□ -0.97
USP46-208ENST00000512656 ALDH1L2Q3SY69 923 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 ANKRD44Q8N8A2 993 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 TEKT1Q969V4 418 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 CLMNQ96JQ2 1002 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 MRIQ9BWK5 157 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 USP44Q9H0E7 712 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 TDRD3Q9H7E2 651 aaKnown RBP8.97□□□□□ -0.97
USP46-208ENST00000512656 TMOD2Q9NZR1 351 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 FZD1Q9UP38 647 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 MAST3O60307 1309 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 KIF16BQ96L93 1317 aa8.97□□□□□ -0.97
USP46-208ENST00000512656 SSC5DA1L4H1 1573 aa8.96□□□□□ -0.97
USP46-208ENST00000512656 TCP10L2B9ZVM9 353 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 WDHD1O75717 1129 aaPredicted RBP8.96□□□□□ -0.98
USP46-208ENST00000512656 CT47B1P0C2W7 299 aaPredicted RBP8.96□□□□□ -0.98
USP46-208ENST00000512656 PTK2Q05397 1052 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 SLFN5Q08AF3 891 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 ARHGEF6Q15052 776 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 PUM3Q15397 648 aaKnown RBP8.96□□□□□ -0.98
USP46-208ENST00000512656 LRRC24Q50LG9 513 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 ERO1AQ96HE7 468 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 SMC4Q9NTJ3 1288 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 IQSEC3Q9UPP2 1182 aaPredicted RBP8.96□□□□□ -0.98
USP46-208ENST00000512656 CSADQ9Y600 493 aa8.96□□□□□ -0.98
USP46-208ENST00000512656 A0A1B0GUL6 1792 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 EYA2O00167 538 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 IGF2BP3O00425 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP46-208ENST00000512656 AP1G2O75843 785 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 SLC5A1P13866 664 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 GTF2A2P52657 109 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 NR6A1Q15406 480 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 FKBP1CQ5VVH2 108 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 INTS3Q68E01 1043 aaKnown RBP8.95□□□□□ -0.98
USP46-208ENST00000512656 FAM83AQ86UY5 434 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 VGLL2Q8N8G2 317 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 WDR66Q8TBY9 1149 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 LPIN2Q92539 896 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 OPTNQ96CV9 577 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 ZDHHC15Q96MV8 337 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
USP46-208ENST00000512656 R3HDMLQ9H3Y0 253 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 ELP3Q9H9T3 547 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 GNL3LQ9NVN8 582 aaKnown RBP8.95□□□□□ -0.98
USP46-208ENST00000512656 ECM29Q5VYK3 1845 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 AOX1Q06278 1338 aa8.95□□□□□ -0.98
USP46-208ENST00000512656 UBTFL1P0CB47 393 aaPredicted RBP8.94□□□□□ -0.98
USP46-208ENST00000512656 DHX9Q08211 1270 aaKnown RBP8.94□□□□□ -0.98
USP46-208ENST00000512656 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 HHIPL2Q6UWX4 724 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 ZBTB33Q86T24 672 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 TEPSINQ96N21 525 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 API5Q9BZZ5 524 aaKnown RBP8.94□□□□□ -0.98
USP46-208ENST00000512656 TMEM39BQ9GZU3 492 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 CEP126Q9P2H0 1117 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 TRIM17Q9Y577 477 aa8.94□□□□□ -0.98
USP46-208ENST00000512656 BMP2P12643 396 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 FGFR2P21802 821 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 SP3Q02447 781 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 CRHR2Q13324 411 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 VGLL4Q14135 290 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.93□□□□□ -0.98
USP46-208ENST00000512656 OTOP1Q7RTM1 612 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP46-208ENST00000512656 KLHDC4Q8TBB5 520 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 EFCC1Q9HA90 598 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 ZFYVE28Q9HCC9 887 aa8.93□□□□□ -0.98
USP46-208ENST00000512656 CCL15-CCL14A0A0B4J2E2 113 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 MAN1A2O60476 641 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 CIAO1O76071 339 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 VSIG8P0DPA2 414 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 CETPP11597 493 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 RFX5P48382 616 aaPredicted RBP8.92□□□□□ -0.98
USP46-208ENST00000512656 CACNB3P54284 484 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 TAF1CQ15572 869 aaPredicted RBP8.92□□□□□ -0.98
USP46-208ENST00000512656 GRIK5Q16478 980 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 CCL15Q16663 113 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 ATP2B3Q16720 1220 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 TMEM259Q4ZIN3 620 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
USP46-208ENST00000512656 ERO1BQ86YB8 467 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 TRMT2AQ8IZ69 625 aaKnown RBP8.92□□□□□ -0.98
USP46-208ENST00000512656 CD99L2Q8TCZ2 262 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 KCTD15Q96SI1 283 aaPredicted RBP8.92□□□□□ -0.98
USP46-208ENST00000512656 PTPN18Q99952 460 aa8.92□□□□□ -0.98
USP46-208ENST00000512656 ZCCHC17Q9NP64 241 aaKnown RBP8.92□□□□□ -0.98
USP46-208ENST00000512656 HTTP42858 3142 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 ARAP2Q8WZ64 1704 aa8.91□□□□□ -0.98
USP46-208ENST00000512656 RPAP1Q9BWH6 1393 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms