RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 ISCA1Q9BUE6 129 aa8.56□□□□□ -1.04
TRIO-219ENST00000512303 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
TRIO-219ENST00000512303 LEMD3Q9Y2U8 911 aa8.56□□□□□ -1.04
TRIO-219ENST00000512303 ZNF804BA4D1E1 1349 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 NUP98P52948 1817 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
TRIO-219ENST00000512303 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
TRIO-219ENST00000512303 PDE8AO60658 829 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 DDX58O95786 925 aaKnown RBP8.55□□□□□ -1.04
TRIO-219ENST00000512303 BMP8BP34820 402 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 TTLL5Q6EMB2 1281 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 HPS1Q92902 700 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 PCDHB11Q9Y5F2 797 aa8.55□□□□□ -1.04
TRIO-219ENST00000512303 CCL15-CCL14A0A0B4J2E2 113 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 FAM187AA6NFU0 413 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 HMMRO75330 724 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 DGAT1O75907 488 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 SASH1O94885 1247 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 CETPP11597 493 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 GRK4P32298 578 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 LACTBP83111 547 aaPredicted RBP8.54□□□□□ -1.04
TRIO-219ENST00000512303 CCL15Q16663 113 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 LRIT3Q3SXY7 679 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 DEFB123Q8N688 67 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 RAET1EQ8TD07 263 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 OPTNQ96CV9 577 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 HOOK2Q96ED9 719 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 ZBED3Q96IU2 234 aaPredicted RBP8.54□□□□□ -1.04
TRIO-219ENST00000512303 KLF16Q9BXK1 252 aaPredicted RBP8.54□□□□□ -1.04
TRIO-219ENST00000512303 IRX2Q9BZI1 471 aaPredicted RBP8.54□□□□□ -1.04
TRIO-219ENST00000512303 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 BSDC1Q9NW68 430 aaPredicted RBP8.54□□□□□ -1.04
TRIO-219ENST00000512303 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 DOLKQ9UPQ8 538 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 CSADQ9Y600 493 aa8.54□□□□□ -1.04
TRIO-219ENST00000512303 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
TRIO-219ENST00000512303 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
TRIO-219ENST00000512303 PROSER3Q2NL68 480 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 UBE2Q1Q7Z7E8 422 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 SMC5Q8IY18 1101 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 CCDC191Q8NCU4 936 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 SH3TC2Q8TF17 1288 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 CLMNQ96JQ2 1002 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 PTPN18Q99952 460 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 COL25A1Q9BXS0 654 aaPredicted RBP8.53□□□□□ -1.04
TRIO-219ENST00000512303 ANKRD2Q9GZV1 360 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 RNF208Q9H0X6 261 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 SRRDQ9UH36 339 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 SCAF8Q9UPN6 1271 aaKnown RBP8.53□□□□□ -1.04
TRIO-219ENST00000512303 FAM205AQ6ZU69 1335 aa8.53□□□□□ -1.04
TRIO-219ENST00000512303 RANBP2P49792 3224 aaKnown RBP8.52□□□□□ -1.04
TRIO-219ENST00000512303 WTIPA6NIX2 430 aaPredicted RBP8.52□□□□□ -1.05
TRIO-219ENST00000512303 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
TRIO-219ENST00000512303 ALDH1L1O75891 902 aa8.52□□□□□ -1.05
TRIO-219ENST00000512303 PCCAP05165 728 aaPredicted RBP8.52□□□□□ -1.05
TRIO-219ENST00000512303 TNNI2P48788 182 aa8.52□□□□□ -1.05
TRIO-219ENST00000512303 WDR4P57081 412 aaKnown RBP8.52□□□□□ -1.05
TRIO-219ENST00000512303 FKBP1AP62942 108 aaKnown RBP8.52□□□□□ -1.05
TRIO-219ENST00000512303 USP4Q13107 963 aa8.52□□□□□ -1.05
TRIO-219ENST00000512303 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
TRIO-219ENST00000512303 KIAA0825Q8IV33 1275 aa8.52□□□□□ -1.05
TRIO-219ENST00000512303 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRIO-219ENST00000512303 BIN2Q9UBW5 565 aaPredicted RBP8.52□□□□□ -1.05
TRIO-219ENST00000512303 MAFBQ9Y5Q3 323 aaPredicted RBP8.52□□□□□ -1.05
TRIO-219ENST00000512303 COL6A3P12111 3177 aa8.52□□□□□ -1.05
TRIO-219ENST00000512303 ATP5J2-PTCD1G3V325 749 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
TRIO-219ENST00000512303 ZIC2O95409 532 aaPredicted RBP8.51□□□□□ -1.05
TRIO-219ENST00000512303 MYCP01106 439 aaPredicted RBP8.51□□□□□ -1.05
TRIO-219ENST00000512303 ANXA1P04083 346 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 IGHMBP2P38935 993 aaKnown RBP8.51□□□□□ -1.05
TRIO-219ENST00000512303 SNAPC2Q13487 334 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 U2AF1L4Q8WU68 220 aaKnown RBP8.51□□□□□ -1.05
TRIO-219ENST00000512303 SHISA4Q96DD7 197 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 ITPKCQ96DU7 683 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 SRCIN1Q9C0H9 1055 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 SEC31BQ9NQW1 1179 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 PRDM6Q9NQX0 595 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 RIPOR2Q9Y4F9 1068 aa8.51□□□□□ -1.05
TRIO-219ENST00000512303 KDM3BQ7LBC6 1761 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 CACNA1FO60840 1977 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 SGPL1O95470 568 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 AVPP01185 164 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 IGHDP01880 384 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 GNAI2P04899 355 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 CCL5P13501 91 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 TIMP2P16035 220 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 KCNJ4P48050 445 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 ERVK-9P63128 1117 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 GTF2IP78347 998 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 NCOA4Q13772 614 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 RASA3Q14644 834 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 EML3Q32P44 896 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
TRIO-219ENST00000512303 USP17L2Q6R6M4 530 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms