RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 CCDC69A6NI79 296 aa11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 GOLGA8BA8MQT2 603 aa11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 PHF20L1A8MW92 1017 aa11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 ZBTB43O43298 467 aa11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 SHROOM1Q2M3G4 852 aaPredicted RBP11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
PDGFRA-209ENST00000512143 DDAH1O94760 285 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 HSP90AA1P07900 732 aaKnown RBP11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 CDC27P30260 824 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 CCT2P78371 535 aaKnown RBP11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 PPP2R5BQ15173 497 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 NTRK3Q16288 839 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 NBPF12Q5TAG4 269 aaPredicted RBP11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 NFXL1Q6ZNB6 911 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 TMEM179Q6ZVK1 233 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 MIGA2Q7L4E1 593 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 FANCBQ8NB91 859 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 MKL1Q969V6 931 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 CHMP4CQ96CF2 233 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 TRIM34Q9BYJ4 488 aa11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 NCOA5Q9HCD5 579 aaKnown RBP11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 CIZ1Q9ULV3 898 aaPredicted RBP11.68□□□□□ -0.54
PDGFRA-209ENST00000512143 JAK2O60674 1132 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 CALM1P0DP23 149 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 CALM2P0DP24 149 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 CALM3P0DP25 149 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 CAP2P40123 477 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 METAP2P50579 478 aaKnown RBP eCLIP11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 PPP4R3BQ5MIZ7 849 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 SYNE3Q6ZMZ3 975 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 MICU3Q86XE3 530 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 RAB11FIP4Q86YS3 637 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 PNMA1Q8ND90 353 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 KAT14Q9H8E8 782 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 NYAP2Q9P242 653 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 STX8Q9UNK0 236 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
PDGFRA-209ENST00000512143 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 DHX16O60231 1041 aaKnown RBP11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 GDF11O95390 407 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 TTLL1O95922 423 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 GH2P01242 217 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 FDPSP14324 419 aaKnown RBP11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 RXRAP19793 462 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 FUT2Q10981 343 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 SEPT2Q15019 361 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 RTN1Q16799 776 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 PNMA8AQ86V59 439 aaPredicted RBP11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 DCPSQ96C86 337 aaKnown RBP11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 HOOK2Q96ED9 719 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 GINM1Q9NU53 330 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 SMC3Q9UQE7 1217 aa11.66□□□□□ -0.54
PDGFRA-209ENST00000512143 PTPDC1A2A3K4 754 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 DTNBO60941 627 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 SNHG28P0DPA3 235 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 IFNAR1P17181 557 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 GJB2P29033 226 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 GRM4Q14833 912 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 SUPT20HL1Q3ZLR7 823 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 PRAMEF18Q5VWM3 479 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 DCAF15Q66K64 600 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 NBPF11Q86T75 865 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 ZNF341Q9BYN7 854 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 CHMP5Q9NZZ3 219 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 CLIP2Q9UDT6 1046 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 ZBTB21Q9ULJ3 1066 aa11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
PDGFRA-209ENST00000512143 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 PALM3A6NDB9 673 aaPredicted RBP11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 ADM5C9JUS6 153 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 CTNND1O60716 968 aaKnown RBP11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 EEF2P13639 858 aaKnown RBP11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 HMGN5P82970 282 aaKnown RBP11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 DLK2Q6UY11 383 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 TMTC3Q6ZXV5 915 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 KRT26Q7Z3Y9 468 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 SULF1Q8IWU6 871 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 CCDC144CPQ8IYA2 1237 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 NUP133Q8WUM0 1156 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 KLRG1Q96E93 195 aa11.64□□□□□ -0.55
PDGFRA-209ENST00000512143 RBM28Q9NW13 759 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms