RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 ATG4CQ96DT6 458 aa5.97□□□□□ -1.45
CALCOCO2-220ENST00000511816 DHRS1Q96LJ7 313 aa5.97□□□□□ -1.45
CALCOCO2-220ENST00000511816 MFSD14AQ96MC6 490 aa5.97□□□□□ -1.45
CALCOCO2-220ENST00000511816 CNNM2Q9H8M5 875 aa5.97□□□□□ -1.45
CALCOCO2-220ENST00000511816 SIRPGQ9P1W8 387 aa5.97□□□□□ -1.45
CALCOCO2-220ENST00000511816 RNF112Q9ULX5 631 aa5.97□□□□□ -1.45
CALCOCO2-220ENST00000511816 SMAD7O15105 426 aaKnown RBP5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 CST3P01034 146 aaPredicted RBP5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 NEFMP07197 916 aa5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 CYP7A1P22680 504 aa5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 FXNQ16595 210 aa5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 BBS9Q3SYG4 887 aa5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 SEMA6CQ9H3T2 930 aa5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 LEMD3Q9Y2U8 911 aa5.96□□□□□ -1.46
CALCOCO2-220ENST00000511816 WDR64B1ANS9 1081 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 CHURC1-FNTBB4DL54 471 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 TNFRSF10CO14798 259 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 ITGB7P26010 798 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 ETV3P41162 512 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 PRAMEF13Q5VWM6 474 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 INTS5Q6P9B9 1019 aaKnown RBP5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 SHKBP1Q8TBC3 707 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 CYB5D2Q8WUJ1 264 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 COX4I2Q96KJ9 171 aa5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 PHAXQ9H814 394 aaKnown RBP5.95□□□□□ -1.46
CALCOCO2-220ENST00000511816 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 RGS13O14921 159 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 COBLO75128 1261 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 NTF4P34130 210 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 RAB33AQ14088 237 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 SLBPQ14493 270 aaKnown RBP eCLIP5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 CYP27C1Q4G0S4 372 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 ARHGAP27Q6ZUM4 889 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 ARMCX6Q7L4S7 300 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 DPH6Q7L8W6 267 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 MKL1Q969V6 931 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 OSBPL2Q9H1P3 480 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 FBRSQ9HAH7 460 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 LGR6Q9HBX8 967 aa5.94□□□□□ -1.46
CALCOCO2-220ENST00000511816 UPK3BL1B0FP48 263 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 UPK3BL2E5RIL1 263 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 NAT2P11245 290 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 RNF4P78317 190 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 NKG7Q16617 165 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 LARP1BQ659C4 914 aaKnown RBP5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 ZAR1Q86SH2 424 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 NBPF11Q86T75 865 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 TTC6Q86TZ1 520 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 HNRNPLLQ8WVV9 542 aaKnown RBP5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 SMARCC1Q92922 1105 aaPredicted RBP5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 LNPKQ9C0E8 428 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 ANTXR1Q9H6X2 564 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 PCMTD2Q9NV79 361 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 PIM2Q9P1W9 311 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 SHROOM4Q9ULL8 1493 aa5.93□□□□□ -1.46
CALCOCO2-220ENST00000511816 A0A1W2PQH9 124 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 CYP26A1O43174 497 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 KLF4O43474 513 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 CLEC3AO75596 197 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 DDAH1O94760 285 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 LRP8Q14114 963 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 NCAPHQ15003 741 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 LETMD1Q6P1Q0 360 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 UNC5AQ6ZN44 842 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 NOP9Q86U38 636 aaKnown RBP5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 ZDHHC13Q8IUH4 622 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 FAM169BQ8N8A8 192 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 XAGE3Q8WTP9 111 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 MRFAP1L1Q96HT8 127 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 KIF2CQ99661 725 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 MIPEPQ99797 713 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 ZSWIM4Q9H7M6 989 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 ZFP64Q9NPA5 681 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 PRDM10Q9NQV6 1147 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 GTF2IRD1Q9UHL9 959 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 CEP131Q9UPN4 1083 aa5.92□□□□□ -1.46
CALCOCO2-220ENST00000511816 TGFB1P01137 390 aa5.91□□□□□ -1.46
CALCOCO2-220ENST00000511816 RUFY4Q6ZNE9 571 aa5.91□□□□□ -1.46
CALCOCO2-220ENST00000511816 LRP10Q7Z4F1 713 aa5.91□□□□□ -1.46
CALCOCO2-220ENST00000511816 SLC9A7Q96T83 725 aa5.91□□□□□ -1.46
CALCOCO2-220ENST00000511816 DPH2Q9BQC3 489 aaPredicted RBP5.91□□□□□ -1.46
CALCOCO2-220ENST00000511816 TPX2Q9ULW0 747 aaKnown RBP5.91□□□□□ -1.46
CALCOCO2-220ENST00000511816 DNAJA2O60884 412 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 F13BP05160 661 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 SSTR4P31391 388 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 SLC7A5Q01650 507 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 IFRD2Q12894 506 aaPredicted RBP5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 DDR2Q16832 855 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 CCDC144BQ3MJ40 725 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 GNPTABQ3T906 1256 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 OGFOD3Q6PK18 319 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 VHLLQ6RSH7 139 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 BAHD1Q8TBE0 780 aaPredicted RBP5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 SLC6A18Q96N87 628 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 SRPK1Q96SB4 655 aaKnown RBP5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 LRRC4CQ9HCJ2 640 aa5.9□□□□□ -1.46
CALCOCO2-220ENST00000511816 FAM87AP0C7U9 286 aa5.89□□□□□ -1.47
CALCOCO2-220ENST00000511816 FOSL1P15407 271 aa5.89□□□□□ -1.47
CALCOCO2-220ENST00000511816 PMS1P54277 932 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms