RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 ZSWIM5Q9P217 1185 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 LIMA1Q9UHB6 759 aaKnown RBP10.33□□□□□ -0.76
SNF8-210ENST00000511214 ANAPC4Q9UJX5 808 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 DISP2A7MBM2 1401 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 GSG1L2A8MUP6 293 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 POLR3GO15318 223 aaPredicted RBP10.32□□□□□ -0.76
SNF8-210ENST00000511214 PDE8AO60658 829 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 STARD3NLO95772 234 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 PCP11498 1178 aaKnown RBP10.32□□□□□ -0.76
SNF8-210ENST00000511214 SLC5A1P13866 664 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 IL2RBP14784 551 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 GOLGA8FQ08AF8 430 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 GOLGA8DPQ0D2H9 430 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 DPYDQ12882 1025 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 PI16Q6UXB8 463 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 RAD9BQ6WBX8 426 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 ZNF662Q6ZS27 426 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 NLRP10Q86W26 655 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 FANCBQ8NB91 859 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 ANKRD20A12PQ8NF67 263 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 NAPGQ99747 312 aaPredicted RBP10.32□□□□□ -0.76
SNF8-210ENST00000511214 CARD10Q9BWT7 1032 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 CSRNP2Q9H175 543 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 SENP2Q9HC62 589 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 SAMSN1Q9NSI8 373 aaKnown RBP10.32□□□□□ -0.76
SNF8-210ENST00000511214 RBM28Q9NW13 759 aaKnown RBP10.32□□□□□ -0.76
SNF8-210ENST00000511214 PCDHB6Q9Y5E3 794 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 CHD4Q14839 1912 aa10.32□□□□□ -0.76
SNF8-210ENST00000511214 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 SHANK3Q9BYB0 1731 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 CTAGE15A4D2H0 777 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 ERVV-1B6SEH8 477 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 PRPF3O43395 683 aaKnown RBP10.31□□□□□ -0.76
SNF8-210ENST00000511214 CTAGE8P0CG41 777 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 CALM1P0DP23 149 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 CALM2P0DP24 149 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 CALM3P0DP25 149 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 RXRAP19793 462 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 ACTN2P35609 894 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 KRT2P35908 639 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 TRAPPC10P48553 1259 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 AKAP17AQ02040 695 aaKnown RBP10.31□□□□□ -0.76
SNF8-210ENST00000511214 RBL2Q08999 1139 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 KARSQ15046 597 aaKnown RBP10.31□□□□□ -0.76
SNF8-210ENST00000511214 CHRNA2Q15822 529 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 ZSCAN26Q16670 478 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 WDR93Q6P2C0 686 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 CYP26C1Q6V0L0 522 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 CTAGE6Q86UF2 777 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 CTAGE4Q8IX94 777 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 ZNF654Q8IZM8 581 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 FAM177A1Q8N128 213 aaPredicted RBP10.31□□□□□ -0.76
SNF8-210ENST00000511214 SPATA5Q8NB90 893 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 FAM71BQ8TC56 605 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 FAM89AQ96GI7 184 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 PAGE5Q96GU1 130 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 RPGRIP1Q96KN7 1286 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 PHF20Q9BVI0 1012 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 GREM2Q9H772 168 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 ANKZF1Q9H8Y5 726 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 VIPAS39Q9H9C1 493 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 BRMS1Q9HCU9 246 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 MED4Q9NPJ6 270 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 RMND1Q9NWS8 449 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 RWDD2AQ9UIY3 292 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 ADAM21Q9UKJ8 722 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 DENND2AQ9ULE3 1009 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 L1RE1Q9UN81 338 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 BCORQ6W2J9 1755 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 MYH3P11055 1940 aa10.31□□□□□ -0.76
SNF8-210ENST00000511214 COL5A2P05997 1499 aaPredicted RBP10.3□□□□□ -0.76
SNF8-210ENST00000511214 MYO5AQ9Y4I1 1855 aaKnown RBP10.3□□□□□ -0.76
SNF8-210ENST00000511214 SOWAHDA6NJG2 315 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 IRS4O14654 1257 aaPredicted RBP10.3□□□□□ -0.76
SNF8-210ENST00000511214 MBD4O95243 580 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 GUCY1A2P33402 732 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 PHKA1P46020 1223 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 NT5C2P49902 561 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 GRIN1Q05586 938 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 RAD51AP2Q09MP3 1159 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 KIF4BQ2VIQ3 1234 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 TRMT44Q8IYL2 757 aaKnown RBP10.3□□□□□ -0.76
SNF8-210ENST00000511214 CTCFLQ8NI51 663 aaPredicted RBP10.3□□□□□ -0.76
SNF8-210ENST00000511214 NKX2-3Q8TAU0 364 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 DESI2Q9BSY9 194 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 TMOD3Q9NYL9 352 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
SNF8-210ENST00000511214 KCNJ14Q9UNX9 436 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 PLCH1Q4KWH8 1693 aa10.3□□□□□ -0.76
SNF8-210ENST00000511214 TEX33O43247 280 aa10.29□□□□□ -0.76
SNF8-210ENST00000511214 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
SNF8-210ENST00000511214 GYPCP04921 128 aa10.29□□□□□ -0.76
SNF8-210ENST00000511214 TDO2P48775 406 aa10.29□□□□□ -0.76
SNF8-210ENST00000511214 ST5P78524 1137 aa10.29□□□□□ -0.76
SNF8-210ENST00000511214 CTDSPL2Q05D32 466 aa10.29□□□□□ -0.76
SNF8-210ENST00000511214 SEC23AQ15436 765 aa10.29□□□□□ -0.76
SNF8-210ENST00000511214 MAP9Q49MG5 647 aa10.29□□□□□ -0.76
SNF8-210ENST00000511214 SPECC1Q5M775 1068 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms