RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 SYNPO2Q9UMS6 1093 aa19.56■□□□□ 0.72
SCAMP1-203ENST00000510030 SMC3Q9UQE7 1217 aa19.56■□□□□ 0.72
SCAMP1-203ENST00000510030 GREB1LQ9C091 1923 aaPredicted RBP19.56■□□□□ 0.72
SCAMP1-203ENST00000510030 EGFRP00533 1210 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 PDCP20941 246 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 KIF5BP33176 963 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 EPHX2P34913 555 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 MAP3K10Q02779 954 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 COL9A3Q14050 684 aaPredicted RBP19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 SUPT20HL1Q3ZLR7 823 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 COL13A1Q5TAT6 717 aaPredicted RBP19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 CCDC83Q8IWF9 413 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 ZNF654Q8IZM8 581 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 JMYQ8N9B5 988 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 TRPM4Q8TD43 1214 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 ZKSCAN3Q9BRR0 538 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 TMEM39BQ9GZU3 492 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 KANSL2Q9H9L4 492 aa19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
SCAMP1-203ENST00000510030 SMIM22K7EJ46 135 aa19.54■□□□□ 0.72
SCAMP1-203ENST00000510030 TOP1P11387 765 aaKnown RBP19.54■□□□□ 0.72
SCAMP1-203ENST00000510030 EVX2Q03828 476 aa19.54■□□□□ 0.72
SCAMP1-203ENST00000510030 SULF1Q8IWU6 871 aa19.54■□□□□ 0.72
SCAMP1-203ENST00000510030 STX8Q9UNK0 236 aa19.54■□□□□ 0.72
SCAMP1-203ENST00000510030 GOLGA8AA7E2F4 631 aa19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 MPHOSPH10O00566 681 aaKnown RBP19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 TTLL1O95922 423 aa19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 STK3Q13188 491 aa19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 ABCB5Q2M3G0 1257 aa19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 CTCFLQ8NI51 663 aaPredicted RBP19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 CHMP5Q9NZZ3 219 aa19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 BRPF3Q9ULD4 1205 aa19.53■□□□□ 0.72
SCAMP1-203ENST00000510030 LARGE1O95461 756 aa19.52■□□□□ 0.72
SCAMP1-203ENST00000510030 NOVP48745 357 aa19.52■□□□□ 0.72
SCAMP1-203ENST00000510030 NUCB2P80303 420 aa19.52■□□□□ 0.72
SCAMP1-203ENST00000510030 RTN1Q16799 776 aa19.52■□□□□ 0.72
SCAMP1-203ENST00000510030 DNAJC18Q9H819 358 aa19.52■□□□□ 0.72
SCAMP1-203ENST00000510030 MTMR4Q9NYA4 1195 aa19.52■□□□□ 0.72
SCAMP1-203ENST00000510030 IGKV6D-41A0A0C4DH26 115 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 AKR1B1P15121 316 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 GNAQP50148 359 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 SCRN1Q12765 414 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 PNMA1Q8ND90 353 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 RGS22Q8NE09 1264 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 CEP95Q96GE4 821 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 TEPSINQ96N21 525 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 LARP6Q9BRS8 491 aaKnown RBP19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 SH2D4AQ9H788 454 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 IL17RBQ9NRM6 502 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 RBM27Q9P2N5 1060 aaKnown RBP19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 PGAP2Q9UHJ9 254 aa19.51■□□□□ 0.71
SCAMP1-203ENST00000510030 ASNSP08243 561 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 NF2P35240 595 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 HIRAP54198 1017 aaPredicted RBP19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 RCSD1Q6JBY9 416 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 CHADLQ6NUI6 762 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 TRIM22Q8IYM9 498 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 NECAB1Q8N987 351 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 FANCBQ8NB91 859 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 SPRYD3Q8NCJ5 442 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 LZTS2Q9BRK4 669 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 ZNF341Q9BYN7 854 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 TAF1DQ9H5J8 278 aaPredicted RBP19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 GPHNQ9NQX3 736 aaPredicted RBP19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 NYAP2Q9P242 653 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 HPS5Q9UPZ3 1129 aa19.5■□□□□ 0.71
SCAMP1-203ENST00000510030 TROAPQ12815 778 aa19.49■□□□□ 0.71
SCAMP1-203ENST00000510030 EAPPQ56P03 285 aaPredicted RBP19.49■□□□□ 0.71
SCAMP1-203ENST00000510030 FAM184AQ8NB25 1140 aa19.49■□□□□ 0.71
SCAMP1-203ENST00000510030 NUP133Q8WUM0 1156 aa19.49■□□□□ 0.71
SCAMP1-203ENST00000510030 WASF1Q92558 559 aa19.49■□□□□ 0.71
SCAMP1-203ENST00000510030 ARHGEF10LQ9HCE6 1279 aa19.49■□□□□ 0.71
SCAMP1-203ENST00000510030 NMT2O60551 498 aa19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 CTNND1O60716 968 aaKnown RBP19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 CCT2P78371 535 aaKnown RBP19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 ICA1Q05084 483 aa19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 SMARCC2Q8TAQ2 1214 aa19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 NKX2-3Q8TAU0 364 aa19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 TMEM47Q9BQJ4 181 aa19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 MYH4Q9Y623 1939 aa19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
SCAMP1-203ENST00000510030 HSPA1AP0DMV8 641 aaKnown RBP19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 HSPA1BP0DMV9 641 aaKnown RBP19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 IFNAR1P17181 557 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 GJB2P29033 226 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 DDIT3P35638 169 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 CAP2P40123 477 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 KRT26Q7Z3Y9 468 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 USP48Q86UV5 1035 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 NSUN7Q8NE18 718 aaKnown RBP19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 MKL1Q969V6 931 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 FOXD4L1Q9NU39 408 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 ZBTB21Q9ULJ3 1066 aa19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 ASTN2O75129 1339 aaPredicted RBP19.47■□□□□ 0.71
SCAMP1-203ENST00000510030 ATAD5Q96QE3 1844 aa19.46■□□□□ 0.71
SCAMP1-203ENST00000510030 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
SCAMP1-203ENST00000510030 FAM196BA6NMK8 535 aa19.46■□□□□ 0.71
SCAMP1-203ENST00000510030 CAPN15O75808 1086 aa19.46■□□□□ 0.71
SCAMP1-203ENST00000510030 GH2P01242 217 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms