RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ARMCX6Q7L4S7 300 aa6.29□□□□□ -1.4
NIPBL-206ENST00000509429 PPP1R13LQ8WUF5 828 aa6.29□□□□□ -1.4
NIPBL-206ENST00000509429 KCNB2Q92953 911 aa6.29□□□□□ -1.4
NIPBL-206ENST00000509429 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
NIPBL-206ENST00000509429 RPS26P11Q5JNZ5 115 aaPredicted RBP6.28□□□□□ -1.4
NIPBL-206ENST00000509429 USP51Q70EK9 711 aa6.28□□□□□ -1.4
NIPBL-206ENST00000509429 CREG2Q8IUH2 290 aa6.28□□□□□ -1.4
NIPBL-206ENST00000509429 GALNT12Q8IXK2 581 aa6.28□□□□□ -1.4
NIPBL-206ENST00000509429 NAF1Q96HR8 494 aaKnown RBP6.28□□□□□ -1.4
NIPBL-206ENST00000509429 NECAB3Q96P71 396 aaPredicted RBP6.28□□□□□ -1.4
NIPBL-206ENST00000509429 CNTD2Q9H8S5 307 aa6.28□□□□□ -1.4
NIPBL-206ENST00000509429 ZNF777Q9ULD5 760 aaPredicted RBP6.28□□□□□ -1.4
NIPBL-206ENST00000509429 POLIQ9UNA4 740 aa6.28□□□□□ -1.4
NIPBL-206ENST00000509429 LRIG2O94898 1065 aa6.27□□□□□ -1.41
NIPBL-206ENST00000509429 ZNF157P51786 506 aaPredicted RBP6.27□□□□□ -1.41
NIPBL-206ENST00000509429 FAM69CQ0P6D2 419 aa6.27□□□□□ -1.41
NIPBL-206ENST00000509429 FERMT3Q86UX7 667 aa6.27□□□□□ -1.41
NIPBL-206ENST00000509429 CERS3Q8IU89 383 aa6.27□□□□□ -1.41
NIPBL-206ENST00000509429 FAM177A1Q8N128 213 aaPredicted RBP6.27□□□□□ -1.41
NIPBL-206ENST00000509429 GPR160Q9UJ42 338 aa6.27□□□□□ -1.41
NIPBL-206ENST00000509429 ZNF20P17024 532 aa6.26□□□□□ -1.41
NIPBL-206ENST00000509429 RFX1P22670 979 aa6.26□□□□□ -1.41
NIPBL-206ENST00000509429 RBM25P49756 843 aaKnown RBP6.26□□□□□ -1.41
NIPBL-206ENST00000509429 SETQ01105 290 aaPredicted RBP6.26□□□□□ -1.41
NIPBL-206ENST00000509429 PPM1JQ5JR12 505 aa6.26□□□□□ -1.41
NIPBL-206ENST00000509429 CDC37L1Q7L3B6 337 aa6.26□□□□□ -1.41
NIPBL-206ENST00000509429 PDZD3Q86UT5 571 aa6.26□□□□□ -1.41
NIPBL-206ENST00000509429 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
NIPBL-206ENST00000509429 MTMR7Q9Y216 660 aa6.26□□□□□ -1.41
NIPBL-206ENST00000509429 FZD7O75084 574 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 CBX7O95931 251 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 ITGB3P05106 788 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 SLURP1P55000 103 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 KIAA0319Q5VV43 1072 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 TMED8Q6PL24 325 aaPredicted RBP6.25□□□□□ -1.41
NIPBL-206ENST00000509429 CRIP3Q6Q6R5 217 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 ZNF575Q86XF7 245 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 SPPL2CQ8IUH8 684 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 ZNF428Q96B54 188 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 SHISA4Q96DD7 197 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 PCED1AQ9H1Q7 454 aa6.25□□□□□ -1.41
NIPBL-206ENST00000509429 TEX2Q8IWB9 1127 aa6.24□□□□□ -1.41
NIPBL-206ENST00000509429 KCT2Q8NC54 265 aa6.24□□□□□ -1.41
NIPBL-206ENST00000509429 DHX38Q92620 1227 aaKnown RBP6.24□□□□□ -1.41
NIPBL-206ENST00000509429 USP40Q9NVE5 1235 aa6.24□□□□□ -1.41
NIPBL-206ENST00000509429 PTMSP20962 102 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 EIF1AXP47813 144 aaKnown RBP6.23□□□□□ -1.41
NIPBL-206ENST00000509429 TNK2Q07912 1038 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 FAAP100Q0VG06 881 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 GLIPR1L2Q4G1C9 344 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 ADGRF1Q5T601 910 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 MZB1Q8WU39 189 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 PLCD4Q9BRC7 762 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 PRDM16Q9HAZ2 1276 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 PICK1Q9NRD5 415 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 USP35Q9P2H5 1018 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 TNFRSF18Q9Y5U5 241 aa6.23□□□□□ -1.41
NIPBL-206ENST00000509429 FANCGO15287 622 aa6.22□□□□□ -1.41
NIPBL-206ENST00000509429 VIPR1P32241 457 aa6.22□□□□□ -1.41
NIPBL-206ENST00000509429 USP5P45974 858 aa6.22□□□□□ -1.41
NIPBL-206ENST00000509429 ZNF746Q6NUN9 644 aaPredicted RBP6.22□□□□□ -1.41
NIPBL-206ENST00000509429 ARID4BQ4LE39 1312 aaPredicted RBP6.22□□□□□ -1.41
NIPBL-206ENST00000509429 KIR3DL1P43629 444 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 CDR1P51861 262 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 PLCB3Q01970 1234 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 CHRNEQ04844 493 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 CCDC27Q2M243 656 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 TTC9BQ8N6N2 239 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 COX4I2Q96KJ9 171 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 EHD4Q9H223 541 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 SEPT3Q9UH03 358 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 CSADQ9Y600 493 aa6.21□□□□□ -1.42
NIPBL-206ENST00000509429 WASH4PA8MWX3 477 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 FFAR3O14843 346 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 GALK1P51570 392 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 CAP1Q01518 475 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 RING1Q06587 406 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 ZBTB37Q5TC79 503 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 HELQQ8TDG4 1101 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 C8orf49Q96NF6 230 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 RBM15Q96T37 977 aaKnown RBP eCLIP6.2□□□□□ -1.42
NIPBL-206ENST00000509429 MIPEPQ99797 713 aa6.2□□□□□ -1.42
NIPBL-206ENST00000509429 PPM1GO15355 546 aaPredicted RBP6.19□□□□□ -1.42
NIPBL-206ENST00000509429 RGS19P49795 217 aa6.19□□□□□ -1.42
NIPBL-206ENST00000509429 GAB4Q2WGN9 574 aa6.19□□□□□ -1.42
NIPBL-206ENST00000509429 ALKBH2Q6NS38 261 aa6.19□□□□□ -1.42
NIPBL-206ENST00000509429 PIWIL2Q8TC59 973 aaKnown RBP6.19□□□□□ -1.42
NIPBL-206ENST00000509429 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
NIPBL-206ENST00000509429 MAFGO15525 162 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 MCCP23508 829 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 TPP2P29144 1249 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-206ENST00000509429 EGR3Q06889 387 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 CDCA8Q53HL2 280 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 NT5DC1Q5TFE4 455 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 TMCO4Q5TGY1 634 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 MAP1SQ66K74 1059 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-206ENST00000509429 SPRED1Q7Z699 444 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
NIPBL-206ENST00000509429 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-206ENST00000509429 SAMD11Q96NU1 681 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms