RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 DEXIO95424 95 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 TPM4P67936 248 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 GRIK5Q16478 980 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 IFIT1BQ5T764 474 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 CCDC186Q7Z3E2 898 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 CRACR2BQ8N4Y2 399 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 MYRIPQ8NFW9 859 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 PHKBQ93100 1093 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 MAP7D2Q96T17 732 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 BPIFA3Q9BQP9 254 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 RNF26Q9BY78 433 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 TMX4Q9H1E5 349 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 RBM28Q9NW13 759 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 SMIM22K7EJ46 135 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 PPP6R2O75170 966 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 KCNA3P22001 575 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 U2AF2P26368 475 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 USP5P45974 858 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 SAFBQ15424 915 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 MFSD14BQ5SR56 506 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 PYCARDQ9ULZ3 195 aa13.31□□□□□ -0.28
PRPF40B-203ENST00000508736 TROAPQ12815 778 aa13.3□□□□□ -0.28
PRPF40B-203ENST00000508736 MTERF4Q7Z6M4 381 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-203ENST00000508736 STK11IPQ8N1F8 1099 aa13.3□□□□□ -0.28
PRPF40B-203ENST00000508736 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
PRPF40B-203ENST00000508736 SLC26A6Q9BXS9 759 aa13.3□□□□□ -0.28
PRPF40B-203ENST00000508736 ZC3H12CQ9C0D7 883 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-203ENST00000508736 MYH2Q9UKX2 1941 aa13.3□□□□□ -0.28
PRPF40B-203ENST00000508736 PRDM1O75626 825 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 ZNF202O95125 648 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 BTDP43251 543 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 DDX60LQ5H9U9 1706 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 AXDND1Q5T1B0 1012 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 DHX40Q8IX18 779 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 ANKS1AQ92625 1134 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 CNKSR1Q969H4 720 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 EYA3Q99504 573 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 ZNF287Q9HBT7 754 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 TCP11L1Q9NUJ3 509 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 PFKFB1P16118 471 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 DHX8Q14562 1220 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 DGKHQ86XP1 1220 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 MAP3K14Q99558 947 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 PIM2Q9P1W9 311 aa13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-203ENST00000508736 CYP2D6P10635 497 aa13.28□□□□□ -0.28
PRPF40B-203ENST00000508736 SYKP43405 635 aa13.28□□□□□ -0.28
PRPF40B-203ENST00000508736 RHBDL3P58872 404 aa13.28□□□□□ -0.28
PRPF40B-203ENST00000508736 NLRP12P59046 1061 aa13.28□□□□□ -0.28
PRPF40B-203ENST00000508736 FUT2Q10981 343 aa13.28□□□□□ -0.28
PRPF40B-203ENST00000508736 TTLL6Q8N841 843 aa13.28□□□□□ -0.28
PRPF40B-203ENST00000508736 NUP133Q8WUM0 1156 aa13.28□□□□□ -0.28
PRPF40B-203ENST00000508736 TSPY2A6NKD2 308 aa13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 SMTNL1A8MU46 457 aa13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 PRPF3O43395 683 aaKnown RBP13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 CUTAO60888 179 aa13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 MMP1P03956 469 aa13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 TGFBRAP1Q8WUH2 860 aa13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 SYT17Q9BSW7 474 aa13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 FOXP1Q9H334 677 aaPredicted RBP13.27□□□□□ -0.28
PRPF40B-203ENST00000508736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 GTF2F1P35269 517 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 GSDMDP57764 484 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 GTF2IP78347 998 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 EVX2Q03828 476 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 PODNQ7Z5L7 613 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 NRBP1Q9UHY1 535 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 HOOK1Q9UJC3 728 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 CDK5RAP2Q96SN8 1893 aa13.27□□□□□ -0.29
PRPF40B-203ENST00000508736 KIF13BQ9NQT8 1826 aa13.26□□□□□ -0.29
PRPF40B-203ENST00000508736 FAM237AA0A1B0GTK4 181 aa13.26□□□□□ -0.29
PRPF40B-203ENST00000508736 XBP1P17861 261 aa13.26□□□□□ -0.29
PRPF40B-203ENST00000508736 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-203ENST00000508736 FKBP1AP62942 108 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-203ENST00000508736 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-203ENST00000508736 PTPAQ15257 358 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms