RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ZNF790Q6PG37 636 aa7.08□□□□□ -1.28
HMGB1P44-201ENST00000508597 TEX13AQ9BXU3 409 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P44-201ENST00000508597 MYH16Q9H6N6 1097 aa7.08□□□□□ -1.28
HMGB1P44-201ENST00000508597 TNS1Q9HBL0 1735 aaKnown RBP7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 KRBA1A5PL33 1030 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 E9PSI1 815 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 GNB5O14775 395 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 RGS9O75916 674 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 GDF11O95390 407 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 HOXB7P09629 217 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 HOXD8P13378 290 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 EIF2AK2P19525 551 aaKnown RBP7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 HNRNPUQ00839 825 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 KANK3Q6NY19 840 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 ELMSAN1Q6PJG2 1045 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 PODNQ7Z5L7 613 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 PLD4Q96BZ4 506 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 FMNL2Q96PY5 1086 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 ATG3Q9NT62 314 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 TSPYL4Q9UJ04 414 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 TRIM33Q9UPN9 1127 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 PAPPAQ13219 1627 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 KDM3BQ7LBC6 1761 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 LY75O60449 1722 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 PALLDQ8WX93 1383 aa7.07□□□□□ -1.28
HMGB1P44-201ENST00000508597 UBR2Q8IWV8 1755 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 LILRB5O75023 590 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 KIF4AO95239 1232 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 POLR3DP05423 398 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 DMRTC2Q8IXT2 367 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 CEP120Q8N960 986 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 HHIPQ96QV1 700 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 CAMKK2Q96RR4 588 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 RASSF4Q9H2L5 321 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 DCTN4Q9UJW0 460 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 BRPF3Q9ULD4 1205 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 ASAP1Q9ULH1 1129 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 CACNA1FO60840 1977 aa7.06□□□□□ -1.28
HMGB1P44-201ENST00000508597 CICQ96RK0 1608 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 PHF20L1A8MW92 1017 aa7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 SNRPA1P09661 255 aaKnown RBP7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 CT47B1P0C2W7 299 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 EIF4A1P60842 406 aaKnown RBP7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 ORC1Q13415 861 aa7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 ZNF428Q96B54 188 aa7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 THUMPD2Q9BTF0 503 aaKnown RBP7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 LATS2Q9NRM7 1088 aa7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 HEG1Q9ULI3 1381 aa7.05□□□□□ -1.28
HMGB1P44-201ENST00000508597 NFKBIEO00221 500 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 GPR182O15218 404 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 STARD3NLO95772 234 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 PCSK2P16519 638 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 CES1P23141 567 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 SLFN5Q08AF3 891 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 HYAL2Q12891 473 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 SLC39A6Q13433 755 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 TXNRD1Q16881 649 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 GDF6Q6KF10 455 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 PTF1AQ7RTS3 328 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 TRMT2AQ8IZ69 625 aaKnown RBP7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 TMEM151AQ8N4L1 468 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 FAM129BQ96TA1 746 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 FRRS1LQ9P0K9 344 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 CCNL1Q9UK58 526 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 LAS1LQ9Y4W2 734 aaKnown RBP7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 KCPQ6ZWJ8 1503 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 TAF1LQ8IZX4 1826 aa7.04□□□□□ -1.28
HMGB1P44-201ENST00000508597 RPLP1P05386 114 aaKnown RBP7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 MAPK1P28482 360 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 GRIK4Q16099 956 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 PCSK7Q16549 785 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 TTC9Q92623 222 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 ZNF496Q96IT1 587 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 ASB16Q96NS5 453 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 POP1Q99575 1024 aaKnown RBP7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 RBCK1Q9BYM8 510 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 ZFYVE28Q9HCC9 887 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 MIS18AQ9NYP9 233 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 RREB1Q92766 1687 aa7.03□□□□□ -1.28
HMGB1P44-201ENST00000508597 CNTNAP4Q9C0A0 1308 aa7.02□□□□□ -1.28
HMGB1P44-201ENST00000508597 FANCIQ9NVI1 1328 aa7.02□□□□□ -1.28
HMGB1P44-201ENST00000508597 KCNQ3O43525 872 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 NDUFB5O43674 189 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 GHRHP01286 108 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 USP5P45974 858 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 EZH2Q15910 746 aaKnown RBP7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 TRAPPC3LQ5T215 181 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 PEAR1Q5VY43 1037 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 DUSP27Q5VZP5 1158 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 MSL1Q68DK7 614 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 TMC7Q7Z402 723 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 NCAPG2Q86XI2 1143 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 TTC16Q8NEE8 873 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 CITED4Q96RK1 184 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 NIF3L1Q9GZT8 377 aa7.02□□□□□ -1.29
HMGB1P44-201ENST00000508597 LACRTQ9GZZ8 138 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms