RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SHROOM1Q2M3G4 852 aaPredicted RBP17.81■□□□□ 0.44
RNF4-210ENST00000508235 NOM1Q5C9Z4 860 aaKnown RBP17.81■□□□□ 0.44
RNF4-210ENST00000508235 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 FAM43AQ8N2R8 423 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 SH2D4AQ9H788 454 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 ZFYVE28Q9HCC9 887 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 AGTPBP1Q9UPW5 1226 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 GREB1LQ9C091 1923 aaPredicted RBP17.8■□□□□ 0.44
RNF4-210ENST00000508235 PDHXO00330 501 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 CDC45O75419 566 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 NT5C2P49902 561 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 HMGCS2P54868 508 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 ICA1Q05084 483 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 MOGSQ13724 837 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 IMMTQ16891 758 aaKnown RBP17.8■□□□□ 0.44
RNF4-210ENST00000508235 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 KIAA1683Q9H0B3 1180 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 RNF41Q9H4P4 317 aaPredicted RBP17.8■□□□□ 0.44
RNF4-210ENST00000508235 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
RNF4-210ENST00000508235 TBC1D8O95759 1140 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 TSPY3P0CV98 308 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 TSPY8P0CW00 308 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 LBX1P52954 281 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 CTDSPL2Q05D32 466 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 PPP4R3BQ5MIZ7 849 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 PARK7Q99497 189 aaKnown RBP17.79■□□□□ 0.44
RNF4-210ENST00000508235 TSKSQ9UJT2 592 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 PNMA3Q9UL41 463 aa17.79■□□□□ 0.44
RNF4-210ENST00000508235 ORC4O43929 436 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 PRDM1O75626 825 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 FGRP09769 529 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 CRHR2Q13324 411 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 MFSD6Q6ZSS7 791 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 STAG1Q8WVM7 1258 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 C12orf42Q96LP6 360 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 ESYT1Q9BSJ8 1104 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 IL25Q9H293 177 aa17.78■□□□□ 0.44
RNF4-210ENST00000508235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.78■□□□□ 0.44
RNF4-210ENST00000508235 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
RNF4-210ENST00000508235 TSPY2A6NKD2 308 aa17.77■□□□□ 0.44
RNF4-210ENST00000508235 OSBPP22059 807 aa17.77■□□□□ 0.44
RNF4-210ENST00000508235 HAND2P61296 217 aa17.77■□□□□ 0.44
RNF4-210ENST00000508235 TFAP4Q01664 338 aa17.77■□□□□ 0.44
RNF4-210ENST00000508235 AKNAD1Q5T1N1 836 aa17.77■□□□□ 0.44
RNF4-210ENST00000508235 NEDD1Q8NHV4 660 aa17.77■□□□□ 0.44
RNF4-210ENST00000508235 TOMM22Q9NS69 142 aa17.77■□□□□ 0.44
RNF4-210ENST00000508235 PLIN4Q96Q06 1357 aa17.77■□□□□ 0.43
RNF4-210ENST00000508235 GPR25O00155 361 aa17.76■□□□□ 0.43
RNF4-210ENST00000508235 TLR2O60603 784 aa17.76■□□□□ 0.43
RNF4-210ENST00000508235 NYAP2Q9P242 653 aa17.76■□□□□ 0.43
RNF4-210ENST00000508235 SYNPO2Q9UMS6 1093 aa17.76■□□□□ 0.43
RNF4-210ENST00000508235 TMX2Q9Y320 296 aa17.76■□□□□ 0.43
RNF4-210ENST00000508235 MYH4Q9Y623 1939 aa17.76■□□□□ 0.43
RNF4-210ENST00000508235 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
RNF4-210ENST00000508235 EEF2P13639 858 aaKnown RBP17.75■□□□□ 0.43
RNF4-210ENST00000508235 HOXA7P31268 230 aaPredicted RBP17.75■□□□□ 0.43
RNF4-210ENST00000508235 ZYXQ15942 572 aaKnown RBP17.75■□□□□ 0.43
RNF4-210ENST00000508235 TREML2Q5T2D2 321 aa17.75■□□□□ 0.43
RNF4-210ENST00000508235 ACER1Q8TDN7 264 aa17.75■□□□□ 0.43
RNF4-210ENST00000508235 SMCR8Q8TEV9 937 aaPredicted RBP17.75■□□□□ 0.43
RNF4-210ENST00000508235 LPAR1Q92633 364 aa17.75■□□□□ 0.43
RNF4-210ENST00000508235 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.75■□□□□ 0.43
RNF4-210ENST00000508235 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
RNF4-210ENST00000508235 EMILIN3Q9NT22 766 aa17.75■□□□□ 0.43
RNF4-210ENST00000508235 CASP8AP2Q9UKL3 1982 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 IGKV6D-41A0A0C4DH26 115 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 A0A1W2PRG0 241 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 FKTNO75072 461 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 TTLL1O95922 423 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 IRX3P78415 501 aaPredicted RBP17.74■□□□□ 0.43
RNF4-210ENST00000508235 ATP2B2Q01814 1243 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 PTH1RQ03431 593 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 RRP12Q5JTH9 1297 aaKnown RBP17.74■□□□□ 0.43
RNF4-210ENST00000508235 ESR2Q92731 530 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 MAP4K1Q92918 833 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 CNNM2Q9H8M5 875 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 MTMR4Q9NYA4 1195 aa17.74■□□□□ 0.43
RNF4-210ENST00000508235 VCAM1P19320 739 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 CLEC10AQ8IUN9 316 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 SIAH1Q8IUQ4 282 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 TBC1D10CQ8IV04 446 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 GTF3C2Q8WUA4 911 aaPredicted RBP17.73■□□□□ 0.43
RNF4-210ENST00000508235 ZNF296Q8WUU4 475 aaPredicted RBP17.73■□□□□ 0.43
RNF4-210ENST00000508235 CEP95Q96GE4 821 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 KRT23Q9C075 422 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 NBPF3Q9H094 633 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 VCPKMTQ9H867 229 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 INCENPQ9NQS7 918 aa17.73■□□□□ 0.43
RNF4-210ENST00000508235 USP17L15C9J2P7 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 USP17L13C9JLJ4 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 USP17L11C9JVI0 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 USP17L18D6R9N7 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 USP17L22D6RA61 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 USP17L17D6RBQ6 530 aa17.72■□□□□ 0.43
RNF4-210ENST00000508235 USP17L19D6RCP7 530 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms