RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 IRAK1P51617 712 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 CCNHP51946 323 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 CTSWP56202 376 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 TFCP2Q12800 502 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PPFIA1Q13136 1202 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 TBX2Q13207 712 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 GNL2Q13823 731 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 MCM6Q14566 821 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 RABL6Q3YEC7 729 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 MSL1Q68DK7 614 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 WWC2Q6AWC2 1192 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 TTC19Q6DKK2 380 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 RASEFQ8IZ41 740 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 TTLL11Q8NHH1 800 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 RILPL2Q969X0 211 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 DHX58Q96C10 678 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 CNNM1Q9NRU3 951 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 CDC23Q9UJX2 597 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 RCOR1Q9UKL0 485 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 CFAP45Q9UL16 551 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 C4BP0C0L5 1744 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 USP42Q9H9J4 1324 aaKnown RBP6.94□□□□□ -1.3
KDM3B-204ENST00000507996 SRRM3A6NNA2 597 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-204ENST00000507996 CBFA2T2O43439 604 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 SNUPNO95149 360 aaKnown RBP6.94□□□□□ -1.3
KDM3B-204ENST00000507996 NTSR2O95665 410 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 RFX5P48382 616 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-204ENST00000507996 FAM160A1Q05DH4 1040 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 NCAPHQ15003 741 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 ME3Q16798 604 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 LDHAL6AQ6ZMR3 332 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 VCPKMTQ9H867 229 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 SEC31BQ9NQW1 1179 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 IFNKQ9P0W0 207 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 RPS6KL1Q9Y6S9 549 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 LY75O60449 1722 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 SHTN1A0MZ66 631 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 LRRIQ3A6PVS8 624 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-204ENST00000507996 STX10O60499 249 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 MYBL2P10244 700 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 MCM3P25205 808 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 CCT5P48643 541 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 SKOR1P84550 965 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 MTA1Q13330 715 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 NFIXQ14938 502 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 TPTE2Q6XPS3 522 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 PAIP2Q9BPZ3 127 aaKnown RBP6.94□□□□□ -1.3
KDM3B-204ENST00000507996 HPCAL4Q9UM19 191 aa6.94□□□□□ -1.3
KDM3B-204ENST00000507996 MEFVO15553 781 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 BAG6P46379 1132 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 RPS6KA3P51812 740 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 TIMM10P62072 90 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 ANKRD23Q86SG2 305 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 TAX1BP1Q86VP1 789 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 COL23A1Q86Y22 540 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 VSTM4Q8IW00 320 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 HELBQ8NG08 1087 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 MICAL1Q8TDZ2 1067 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 SH3GL2Q99962 352 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 COPRSQ9NQ92 184 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 KLC4Q9NSK0 619 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 CAPN7Q9Y6W3 813 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 NEDD4P46934 1319 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 GYS1P13807 737 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 PECAM1P16284 738 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 ADD1P35611 737 aaKnown RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 GNG11P61952 73 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 ACTN3Q08043 901 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 RBBP5Q15291 538 aaKnown RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 ANKRD1Q15327 319 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 WHAMMP3Q1A5X7 153 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 DRAXINQ8NBI3 349 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 CCDC102AQ96A19 550 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 EAF2Q96CJ1 260 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 CD248Q9HCU0 757 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 TLR7Q9NYK1 1049 aaKnown RBP6.93□□□□□ -1.3
KDM3B-204ENST00000507996 SSUH2Q9Y2M2 353 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 CYP46A1Q9Y6A2 500 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 TAF1LQ8IZX4 1826 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 EYA2O00167 538 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 VSNL1P62760 191 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 CCDC152Q4G0S7 254 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 FILIP1LQ4L180 1135 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 METTL24Q5JXM2 366 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 EMC10Q5UCC4 262 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 C3orf67Q6ZVT6 689 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 MKL1Q969V6 931 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 NLRP3Q96P20 1036 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 NYXQ9GZU5 481 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 HSD3B7Q9H2F3 369 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 GOLPH3LQ9H4A5 285 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 PLEKHA4Q9H4M7 779 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 KAT14Q9H8E8 782 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 SLC24A3Q9HC58 644 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 SNRKQ9NRH2 765 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 CEP126Q9P2H0 1117 aa6.93□□□□□ -1.3
KDM3B-204ENST00000507996 TARSL2A2RTX5 802 aaKnown RBP6.92□□□□□ -1.3
KDM3B-204ENST00000507996 WDHD1O75717 1129 aaPredicted RBP6.92□□□□□ -1.3
KDM3B-204ENST00000507996 CSF1RP07333 972 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms