RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 ZNF507Q8TCN5 953 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 PCDHB5Q9Y5E4 795 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 IGF2BP3O00425 579 aaKnown RBP eCLIP6.37□□□□□ -1.39
SSBP2-206ENST00000506960 SASH1O94885 1247 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 LRIG2O94898 1065 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 SLITRK5O94991 958 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 SLBPQ14493 270 aaKnown RBP eCLIP6.37□□□□□ -1.39
SSBP2-206ENST00000506960 MAP3K11Q16584 847 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 NKG7Q16617 165 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 SPATS1Q496A3 300 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 HDXQ7Z353 690 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 KCT2Q8NC54 265 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 BAHD1Q8TBE0 780 aaPredicted RBP6.37□□□□□ -1.39
SSBP2-206ENST00000506960 GTF2IRD1Q9UHL9 959 aa6.37□□□□□ -1.39
SSBP2-206ENST00000506960 LIG3P49916 1009 aa6.36□□□□□ -1.39
SSBP2-206ENST00000506960 RPS26P62854 115 aaKnown RBP6.36□□□□□ -1.39
SSBP2-206ENST00000506960 NKPD1Q17RQ9 610 aa6.36□□□□□ -1.39
SSBP2-206ENST00000506960 WNT10AQ9GZT5 417 aa6.36□□□□□ -1.39
SSBP2-206ENST00000506960 PARP2Q9UGN5 583 aa6.36□□□□□ -1.39
SSBP2-206ENST00000506960 RAC2P15153 192 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 CLCN7P51798 805 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 FGD1P98174 961 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 ZNF385BQ569K4 471 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 AGMOQ6ZNB7 445 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 CRELD1Q96HD1 420 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 FAM161BQ96MY7 647 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
SSBP2-206ENST00000506960 SNCAIPQ9Y6H5 919 aa6.35□□□□□ -1.39
SSBP2-206ENST00000506960 RBAK-RBAKDNI3L0D1 243 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 GFRA2O00451 464 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 TFE3P19532 575 aaPredicted RBP6.34□□□□□ -1.39
SSBP2-206ENST00000506960 GRK4P32298 578 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 CAP2P40123 477 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 ETF1P62495 437 aaKnown RBP6.34□□□□□ -1.39
SSBP2-206ENST00000506960 DAB2P98082 770 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 FBXO33Q7Z6M2 555 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 ABHD4Q8TB40 342 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 MIPEPQ99797 713 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 FOXQ1Q9C009 403 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 MAPK8IP1Q9UQF2 711 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 MYRFQ9Y2G1 1151 aa6.34□□□□□ -1.39
SSBP2-206ENST00000506960 GNAT3A8MTJ3 354 aa6.33□□□□□ -1.4
SSBP2-206ENST00000506960 PRR33A8MZF0 331 aa6.33□□□□□ -1.4
SSBP2-206ENST00000506960 CTSHP09668 335 aa6.33□□□□□ -1.4
SSBP2-206ENST00000506960 PSMD2Q13200 908 aa6.33□□□□□ -1.4
SSBP2-206ENST00000506960 HID1Q8IV36 788 aa6.33□□□□□ -1.4
SSBP2-206ENST00000506960 RFXAPO00287 272 aa6.32□□□□□ -1.4
SSBP2-206ENST00000506960 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
SSBP2-206ENST00000506960 LMNB1P20700 586 aa6.32□□□□□ -1.4
SSBP2-206ENST00000506960 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
SSBP2-206ENST00000506960 RIN3Q8TB24 985 aa6.32□□□□□ -1.4
SSBP2-206ENST00000506960 MIR1-1HGQ9H1L0 117 aa6.32□□□□□ -1.4
SSBP2-206ENST00000506960 C19orf73Q9NVV2 129 aa6.32□□□□□ -1.4
SSBP2-206ENST00000506960 TLR6Q9Y2C9 796 aa6.32□□□□□ -1.4
SSBP2-206ENST00000506960 ZBTB7CA1YPR0 619 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 OVOL3O00110 214 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 ST13P50502 369 aaKnown RBP6.31□□□□□ -1.4
SSBP2-206ENST00000506960 TAGLNQ01995 201 aaKnown RBP6.31□□□□□ -1.4
SSBP2-206ENST00000506960 LETMD1Q6P1Q0 360 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 C22orf34Q6ZV56 151 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 TMC4Q7Z404 712 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 MFSD2AQ8NA29 543 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 XAGE3Q8WTP9 111 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 CARS2Q9HA77 564 aaKnown RBP6.31□□□□□ -1.4
SSBP2-206ENST00000506960 KCNK12Q9HB15 430 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 CNOT6Q9ULM6 557 aaKnown RBP6.31□□□□□ -1.4
SSBP2-206ENST00000506960 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
SSBP2-206ENST00000506960 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
SSBP2-206ENST00000506960 F6X3S4 739 aa6.3□□□□□ -1.4
SSBP2-206ENST00000506960 TAF1CQ15572 869 aaPredicted RBP6.3□□□□□ -1.4
SSBP2-206ENST00000506960 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
SSBP2-206ENST00000506960 PHC3Q8NDX5 983 aa6.3□□□□□ -1.4
SSBP2-206ENST00000506960 DPH2Q9BQC3 489 aaPredicted RBP6.3□□□□□ -1.4
SSBP2-206ENST00000506960 NOC4LQ9BVI4 516 aaKnown RBP6.3□□□□□ -1.4
SSBP2-206ENST00000506960 XYLT2Q9H1B5 865 aa6.3□□□□□ -1.4
SSBP2-206ENST00000506960 TJP2Q9UDY2 1190 aa6.3□□□□□ -1.4
SSBP2-206ENST00000506960 TRIM13O60858 407 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 PGRP06401 933 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 XPCQ01831 940 aaPredicted RBP6.29□□□□□ -1.4
SSBP2-206ENST00000506960 PUM1Q14671 1186 aaKnown RBP eCLIP6.29□□□□□ -1.4
SSBP2-206ENST00000506960 SFRP5Q5T4F7 317 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 MRPL41Q8IXM3 137 aaKnown RBP6.29□□□□□ -1.4
SSBP2-206ENST00000506960 HSPA12BQ96MM6 686 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 SEMA3GQ9NS98 782 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 CAPN6Q9Y6Q1 641 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 USP31Q70CQ4 1352 aa6.29□□□□□ -1.4
SSBP2-206ENST00000506960 FAM155AB1AL88 458 aaPredicted RBP6.28□□□□□ -1.4
SSBP2-206ENST00000506960 SEMA7AO75326 666 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 RLBP1P12271 317 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 INSRRP14616 1297 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 DLG4P78352 724 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 RPL6Q02878 288 aaKnown RBP6.28□□□□□ -1.4
SSBP2-206ENST00000506960 EFEMP1Q12805 493 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 TSNAXIP1Q2TAA8 658 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 CDKAL1Q5VV42 579 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 JARID2Q92833 1246 aaPredicted RBP6.28□□□□□ -1.4
SSBP2-206ENST00000506960 ST14Q9Y5Y6 855 aa6.28□□□□□ -1.4
SSBP2-206ENST00000506960 AKAP8O43823 692 aaKnown RBP6.27□□□□□ -1.41
SSBP2-206ENST00000506960 CBX7O95931 251 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms