RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 OTUD7BQ6GQQ9 843 aa21.63■■□□□ 1.05
NPHP4-210ENST00000506941 ANKRD23Q86SG2 305 aa21.63■■□□□ 1.05
NPHP4-210ENST00000506941 ACER1Q8TDN7 264 aa21.63■■□□□ 1.05
NPHP4-210ENST00000506941 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.63■■□□□ 1.05
NPHP4-210ENST00000506941 MKNK2Q9HBH9 465 aa21.63■■□□□ 1.05
NPHP4-210ENST00000506941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.63■■□□□ 1.05
NPHP4-210ENST00000506941 MGAMO43451 1857 aa21.62■■□□□ 1.05
NPHP4-210ENST00000506941 HAND2P61296 217 aa21.62■■□□□ 1.05
NPHP4-210ENST00000506941 CRHR2Q13324 411 aa21.62■■□□□ 1.05
NPHP4-210ENST00000506941 SH3D19Q5HYK7 790 aa21.62■■□□□ 1.05
NPHP4-210ENST00000506941 TREML2Q5T2D2 321 aa21.62■■□□□ 1.05
NPHP4-210ENST00000506941 FASTKD5Q7L8L6 764 aaKnown RBP21.62■■□□□ 1.05
NPHP4-210ENST00000506941 RLFQ13129 1914 aa21.62■■□□□ 1.05
NPHP4-210ENST00000506941 USP17L10C9JJH3 530 aa21.61■■□□□ 1.05
NPHP4-210ENST00000506941 PDHXO00330 501 aa21.61■■□□□ 1.05
NPHP4-210ENST00000506941 SLC3A2P08195 630 aaKnown RBP21.61■■□□□ 1.05
NPHP4-210ENST00000506941 PTH1RQ03431 593 aa21.61■■□□□ 1.05
NPHP4-210ENST00000506941 PDE4BQ07343 736 aa21.61■■□□□ 1.05
NPHP4-210ENST00000506941 SIAH1Q8IUQ4 282 aa21.61■■□□□ 1.05
NPHP4-210ENST00000506941 PROCA1Q8NCQ7 364 aaPredicted RBP21.61■■□□□ 1.05
NPHP4-210ENST00000506941 ZCCHC17Q9NP64 241 aaKnown RBP21.61■■□□□ 1.05
NPHP4-210ENST00000506941 A0A1W2PRG0 241 aa21.6■■□□□ 1.05
NPHP4-210ENST00000506941 TAF1CQ15572 869 aaPredicted RBP21.6■■□□□ 1.05
NPHP4-210ENST00000506941 TBC1D10CQ8IV04 446 aa21.6■■□□□ 1.05
NPHP4-210ENST00000506941 ESYT1Q9BSJ8 1104 aa21.6■■□□□ 1.05
NPHP4-210ENST00000506941 EMILIN3Q9NT22 766 aa21.6■■□□□ 1.05
NPHP4-210ENST00000506941 AGTPBP1Q9UPW5 1226 aa21.6■■□□□ 1.05
NPHP4-210ENST00000506941 PLIN4Q96Q06 1357 aa21.6■■□□□ 1.05
NPHP4-210ENST00000506941 C19orf81C9J6K1 198 aa21.59■■□□□ 1.05
NPHP4-210ENST00000506941 FGRP09769 529 aa21.59■■□□□ 1.05
NPHP4-210ENST00000506941 ICA1Q05084 483 aa21.59■■□□□ 1.05
NPHP4-210ENST00000506941 ZYXQ15942 572 aaKnown RBP21.59■■□□□ 1.05
NPHP4-210ENST00000506941 FEZ1Q99689 392 aa21.59■■□□□ 1.05
NPHP4-210ENST00000506941 KIAA1683Q9H0B3 1180 aa21.59■■□□□ 1.05
NPHP4-210ENST00000506941 ZNF287Q9HBT7 754 aa21.59■■□□□ 1.05
NPHP4-210ENST00000506941 ADGRA2Q96PE1 1338 aa21.58■■□□□ 1.05
NPHP4-210ENST00000506941 IGKV6D-41A0A0C4DH26 115 aa21.58■■□□□ 1.05
NPHP4-210ENST00000506941 CDC45O75419 566 aa21.58■■□□□ 1.05
NPHP4-210ENST00000506941 FAM47AQ5JRC9 791 aa21.58■■□□□ 1.05
NPHP4-210ENST00000506941 ZNF444Q8N0Y2 327 aaPredicted RBP21.58■■□□□ 1.05
NPHP4-210ENST00000506941 COL11A1P12107 1806 aaPredicted RBP21.57■■□□□ 1.04
NPHP4-210ENST00000506941 ORC4O43929 436 aa21.57■■□□□ 1.04
NPHP4-210ENST00000506941 EEF2P13639 858 aaKnown RBP21.57■■□□□ 1.04
NPHP4-210ENST00000506941 USP17L2Q6R6M4 530 aa21.57■■□□□ 1.04
NPHP4-210ENST00000506941 NKX2-3Q8TAU0 364 aa21.57■■□□□ 1.04
NPHP4-210ENST00000506941 C12orf42Q96LP6 360 aa21.57■■□□□ 1.04
NPHP4-210ENST00000506941 KANSL2Q9H9L4 492 aa21.57■■□□□ 1.04
NPHP4-210ENST00000506941 PRDM10Q9NQV6 1147 aa21.57■■□□□ 1.04
NPHP4-210ENST00000506941 SLC45A1Q9Y2W3 748 aa21.57■■□□□ 1.04
NPHP4-210ENST00000506941 NEDD4P46934 1319 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 GPR25O00155 361 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 ZNF213O14771 459 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 CYP2C8P10632 490 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 KIAA1755Q5JYT7 1200 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 AKNAD1Q5T1N1 836 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 NEDD1Q8NHV4 660 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 STAG1Q8WVM7 1258 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 ZFYVE28Q9HCC9 887 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 TMOD4Q9NZQ9 345 aa21.56■■□□□ 1.04
NPHP4-210ENST00000506941 TSPY3P0CV98 308 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 TSPY8P0CW00 308 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 USP14P54578 494 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 TFAP4Q01664 338 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 NOM1Q5C9Z4 860 aaKnown RBP21.55■■□□□ 1.04
NPHP4-210ENST00000506941 CEP95Q96GE4 821 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 LSG1Q9H089 658 aaKnown RBP21.55■■□□□ 1.04
NPHP4-210ENST00000506941 ARHGEF10LQ9HCE6 1279 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 CTNNA3Q9UI47 895 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 TMX2Q9Y320 296 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 A0A0G2JMZ2 1700 aa21.55■■□□□ 1.04
NPHP4-210ENST00000506941 RANBP6O60518 1105 aaKnown RBP21.54■■□□□ 1.04
NPHP4-210ENST00000506941 TLR2O60603 784 aa21.54■■□□□ 1.04
NPHP4-210ENST00000506941 ATP2B2Q01814 1243 aa21.54■■□□□ 1.04
NPHP4-210ENST00000506941 IMMTQ16891 758 aaKnown RBP21.54■■□□□ 1.04
NPHP4-210ENST00000506941 RRP12Q5JTH9 1297 aaKnown RBP21.54■■□□□ 1.04
NPHP4-210ENST00000506941 MFSD6Q6ZSS7 791 aa21.54■■□□□ 1.04
NPHP4-210ENST00000506941 ZNF296Q8WUU4 475 aaPredicted RBP21.54■■□□□ 1.04
NPHP4-210ENST00000506941 MAP4K1Q92918 833 aa21.54■■□□□ 1.04
NPHP4-210ENST00000506941 PARK7Q99497 189 aaKnown RBP21.54■■□□□ 1.04
NPHP4-210ENST00000506941 DOCK3Q8IZD9 2030 aa21.54■■□□□ 1.04
NPHP4-210ENST00000506941 NMT2O60551 498 aa21.53■■□□□ 1.04
NPHP4-210ENST00000506941 VCAM1P19320 739 aa21.53■■□□□ 1.04
NPHP4-210ENST00000506941 ASCC2Q9H1I8 757 aaPredicted RBP21.53■■□□□ 1.04
NPHP4-210ENST00000506941 IL17RBQ9NRM6 502 aa21.53■■□□□ 1.04
NPHP4-210ENST00000506941 TOMM22Q9NS69 142 aa21.53■■□□□ 1.04
NPHP4-210ENST00000506941 MTMR4Q9NYA4 1195 aa21.53■■□□□ 1.04
NPHP4-210ENST00000506941 NYAP2Q9P242 653 aa21.53■■□□□ 1.04
NPHP4-210ENST00000506941 U3KPZ7 1027 aaPredicted RBP21.53■■□□□ 1.04
NPHP4-210ENST00000506941 HTTP42858 3142 aa21.53■■□□□ 1.04
NPHP4-210ENST00000506941 TSPY2A6NKD2 308 aa21.52■■□□□ 1.04
NPHP4-210ENST00000506941 PCP11498 1178 aaKnown RBP21.52■■□□□ 1.04
NPHP4-210ENST00000506941 HOXA7P31268 230 aaPredicted RBP21.52■■□□□ 1.04
NPHP4-210ENST00000506941 RNF41Q9H4P4 317 aaPredicted RBP21.52■■□□□ 1.04
NPHP4-210ENST00000506941 VCPKMTQ9H867 229 aa21.52■■□□□ 1.04
NPHP4-210ENST00000506941 CPA4Q9UI42 421 aa21.52■■□□□ 1.04
NPHP4-210ENST00000506941 RBM8AQ9Y5S9 174 aaKnown RBP21.52■■□□□ 1.04
NPHP4-210ENST00000506941 TAF6LQ9Y6J9 622 aa21.52■■□□□ 1.04
NPHP4-210ENST00000506941 FKTNO75072 461 aa21.51■■□□□ 1.03
NPHP4-210ENST00000506941 CYP21A2P08686 494 aa21.51■■□□□ 1.03
NPHP4-210ENST00000506941 CAP1Q01518 475 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms