RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 FAM155AB1AL88 458 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-205ENST00000506779 EOMESO95936 686 aa5.04□□□□□ -1.6
TOPBP1-205ENST00000506779 C6P13671 934 aa5.04□□□□□ -1.6
TOPBP1-205ENST00000506779 PDE4CQ08493 712 aa5.04□□□□□ -1.6
TOPBP1-205ENST00000506779 SP110Q9HB58 689 aa5.04□□□□□ -1.6
TOPBP1-205ENST00000506779 EPB41L4AQ9HCS5 686 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-205ENST00000506779 CYR61O00622 381 aa5.03□□□□□ -1.6
TOPBP1-205ENST00000506779 NME2P22392 152 aa5.03□□□□□ -1.6
TOPBP1-205ENST00000506779 ARNTP27540 789 aa5.03□□□□□ -1.6
TOPBP1-205ENST00000506779 PDZD3Q86UT5 571 aa5.03□□□□□ -1.6
TOPBP1-205ENST00000506779 C19orf44Q9H6X5 657 aa5.03□□□□□ -1.6
TOPBP1-205ENST00000506779 PRDM5Q9NQX1 630 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-205ENST00000506779 PNMA6FA0A0J9YX94 578 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 C1QTNF3-AMACRE9PGA6 284 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 ZFYVE27Q5T4F4 411 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 NXPE4Q6UWF7 544 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 TMC7Q7Z402 723 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 RNF214Q8ND24 703 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 GPBAR1Q8TDU6 330 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 INTS4Q96HW7 963 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 ADAMTS10Q9H324 1103 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 DCTN4Q9UJW0 460 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 MAPK8IP1Q9UQF2 711 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 SAMM50Q9Y512 469 aa5.02□□□□□ -1.61
TOPBP1-205ENST00000506779 SOWAHDA6NJG2 315 aa5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 PRR33A8MZF0 331 aa5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 MAPK1P28482 360 aa5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 ACVRL1P37023 503 aa5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 ERVK-24P63145 666 aa5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 ZC3H12AQ5D1E8 599 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 TPTE2Q6XPS3 522 aa5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 STK35Q8TDR2 534 aa5.01□□□□□ -1.61
TOPBP1-205ENST00000506779 TACR2P21452 398 aa5□□□□□ -1.61
TOPBP1-205ENST00000506779 PDE6BP35913 854 aa5□□□□□ -1.61
TOPBP1-205ENST00000506779 CDC37L1Q7L3B6 337 aa5□□□□□ -1.61
TOPBP1-205ENST00000506779 THAP5Q7Z6K1 395 aa5□□□□□ -1.61
TOPBP1-205ENST00000506779 Q8N1X5 172 aa5□□□□□ -1.61
TOPBP1-205ENST00000506779 YBX2Q9Y2T7 364 aaKnown RBP5□□□□□ -1.61
TOPBP1-205ENST00000506779 ST14Q9Y5Y6 855 aa5□□□□□ -1.61
TOPBP1-205ENST00000506779 CSADQ9Y600 493 aa5□□□□□ -1.61
TOPBP1-205ENST00000506779 DCDC2CA8MYV0 355 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 GSTT1P30711 240 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 PPM1JQ5JR12 505 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 LILRA2Q8N149 483 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 LINC01356Q8N9X3 169 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 ELMO3Q96BJ8 720 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 CEP44Q9C0F1 390 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 CWC22Q9HCG8 908 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 SMPD4Q9NXE4 827 aa4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 MBD1Q9UIS9 605 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-205ENST00000506779 PLCB3Q01970 1234 aa4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 ZNF252P-AS1Q0IIN9 211 aa4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 ENOX2Q16206 610 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 TIGD5Q53EQ6 642 aa4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 UBXN11Q5T124 520 aa4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 LLGL2Q6P1M3 1020 aa4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 MFSD4AQ8N468 514 aa4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 NECAB3Q96P71 396 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 PCDHA4Q9UN74 947 aa4.98□□□□□ -1.61
TOPBP1-205ENST00000506779 TREHO43280 583 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 FBXO24O75426 580 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 TRIM37O94972 964 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 MAPK8P45983 427 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 EPHB3P54753 998 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 LRRC14Q15048 493 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 ZBTB37Q5TC79 503 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 CPZQ66K79 652 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 MPRIPQ6WCQ1 1025 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 C22orf34Q6ZV56 151 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 C12orf40Q86WS4 652 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 TP53I13Q8NBR0 393 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 KCT2Q8NC54 265 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 C3orf58Q8NDZ4 430 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 NAF1Q96HR8 494 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 SRCIN1Q9C0H9 1055 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 PPM1HQ9ULR3 514 aa4.97□□□□□ -1.61
TOPBP1-205ENST00000506779 PRAMEF27A3QJZ7 478 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 FANCGO15287 622 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 ESR1P03372 595 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 ATP2B2Q01814 1243 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 DSC3Q14574 896 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 ARMCX6Q7L4S7 300 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 UBE3DQ7Z6J8 389 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 PDZD8Q8NEN9 1154 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 GRIN3AQ8TCU5 1115 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 FBF1Q8TES7 1133 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 TRAIPQ9BWF2 469 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 ZSWIM5Q9P217 1185 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 TPX2Q9ULW0 747 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 CAPN6Q9Y6Q1 641 aa4.96□□□□□ -1.62
TOPBP1-205ENST00000506779 ENC1O14682 589 aa4.95□□□□□ -1.62
TOPBP1-205ENST00000506779 N4BP3O15049 544 aa4.95□□□□□ -1.62
TOPBP1-205ENST00000506779 PAGE1O75459 146 aa4.95□□□□□ -1.62
TOPBP1-205ENST00000506779 SRSF3P84103 164 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-205ENST00000506779 FGD1P98174 961 aa4.95□□□□□ -1.62
TOPBP1-205ENST00000506779 CNKSR3Q6P9H4 555 aa4.95□□□□□ -1.62
TOPBP1-205ENST00000506779 ZSCAN29Q8IWY8 852 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms