RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 TREML4Q6UXN2 200 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 CCDC81Q6ZN84 652 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 NOL8Q76FK4 1167 aaKnown RBP6.89□□□□□ -1.31
SNX25-203ENST00000504959 ANKRD24Q8TF21 1146 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 LRRC59Q96AG4 307 aaKnown RBP6.89□□□□□ -1.31
SNX25-203ENST00000504959 CEP63Q96MT8 703 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 NT5C1AQ9BXI3 368 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 C19orf44Q9H6X5 657 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 COL4A3BPQ9Y5P4 624 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 ATP10DQ9P241 1426 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 SLIT3O75094 1523 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 BTBD11A6QL63 1104 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 SPINT1O43278 529 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 GREM1O60565 184 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 EPB42P16452 691 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 EIF2S2P20042 333 aaKnown RBP6.88□□□□□ -1.31
SNX25-203ENST00000504959 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
SNX25-203ENST00000504959 PRPF40BQ6NWY9 871 aaKnown RBP6.88□□□□□ -1.31
SNX25-203ENST00000504959 TPTE2Q6XPS3 522 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 ARHGEF25Q86VW2 580 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 STRIP2Q9ULQ0 834 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 C1orf167Q5SNV9 1468 aa6.88□□□□□ -1.31
SNX25-203ENST00000504959 A0A1W2PNR3 127 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 PF4P02776 101 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 IBSPP21815 317 aaPredicted RBP6.87□□□□□ -1.31
SNX25-203ENST00000504959 TTC22Q5TAA0 569 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 TTC39BQ5VTQ0 682 aaPredicted RBP6.87□□□□□ -1.31
SNX25-203ENST00000504959 PCNX4Q63HM2 1172 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 MPRIPQ6WCQ1 1025 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 DTHD1Q6ZMT9 781 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 C16orf71Q8IYS4 520 aaPredicted RBP6.87□□□□□ -1.31
SNX25-203ENST00000504959 GOLM1Q8NBJ4 401 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 CPLX3Q8WVH0 158 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 PMEPA1Q969W9 287 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 ZCCHC2Q9C0B9 1178 aaKnown RBP6.87□□□□□ -1.31
SNX25-203ENST00000504959 LGR6Q9HBX8 967 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 PPM1HQ9ULR3 514 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 CEMIPQ8WUJ3 1361 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 ALS2Q96Q42 1657 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 EDN3P14138 238 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 MSX1P28360 303 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 LIG3P49916 1009 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 ANAPC15P60006 121 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 CELF2-AS1Q8N7Q2 184 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 SHDQ96IW2 340 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 TCF12Q99081 682 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 TSEN34Q9BSV6 310 aaKnown RBP6.87□□□□□ -1.31
SNX25-203ENST00000504959 PCDH12Q9NPG4 1184 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 PPT2Q9UMR5 302 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 PXDNLA1KZ92 1463 aa6.87□□□□□ -1.31
SNX25-203ENST00000504959 AK9Q5TCS8 1911 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 NCAPD2Q15021 1401 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 RNMTO43148 476 aaKnown RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 SASH3O75995 380 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 HSP90AA1P07900 732 aaKnown RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 HSP90AB1P08238 724 aaKnown RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 HOXB7P09629 217 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 UBTFL1P0CB47 393 aaPredicted RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 GSPT1P15170 499 aaKnown RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 ACPPP15309 386 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 EIF4A1P60842 406 aaKnown RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 APOBRQ0VD83 1088 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 PLEKHG4Q58EX7 1191 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 RNF217Q8TC41 542 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 SH3TC2Q8TF17 1288 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 ANTXR1Q9H6X2 564 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 PHAXQ9H814 394 aaKnown RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 LIN7BQ9HAP6 207 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 MED1Q15648 1581 aaPredicted RBP6.86□□□□□ -1.31
SNX25-203ENST00000504959 CAMTA1Q9Y6Y1 1673 aa6.86□□□□□ -1.31
SNX25-203ENST00000504959 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 RHOQP17081 205 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 TARSP26639 723 aaKnown RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 ATP8B2P98198 1209 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 CAMK2GQ13555 558 aaPredicted RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 SV2BQ7L1I2 683 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 KRT25Q7Z3Z0 450 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 CNTNAP3BQ96NU0 1288 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 SRRTQ9BXP5 876 aaKnown RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 CNTNAP3Q9BZ76 1288 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 LRRCC1Q9C099 1032 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 BRINP2Q9C0B6 783 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 FANCLQ9NW38 375 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 EXOC6BQ9Y2D4 811 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 LRRFIP2Q9Y608 721 aaKnown RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 STRCP1A6NGW2 1772 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 SIPA1L3O60292 1781 aaPredicted RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 A0A1B0GTH6 734 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 COL9A2Q14055 689 aaPredicted RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 SNAP47Q5SQN1 464 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 RPUSD2Q8IZ73 545 aaKnown RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 LILRB2Q8N423 598 aa6.85□□□□□ -1.31
SNX25-203ENST00000504959 ZCRB1Q8TBF4 217 aaKnown RBP6.85□□□□□ -1.31
SNX25-203ENST00000504959 OTUD7AQ8TE49 926 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms