RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 COL9A3Q14050 684 aaPredicted RBP8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 IQCEQ6IPM2 695 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 C8orf74Q6P047 294 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 MLXIPLQ9NP71 852 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 MYO6Q9UM54 1294 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 JAG2Q9Y219 1238 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 TMEM110-MUSTN1A8MSY1 372 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 HSPA1LP34931 641 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 PUS7Q96PZ0 661 aaKnown RBP8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 USP44Q9H0E7 712 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 C19orf44Q9H6X5 657 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 NLRC4Q9NPP4 1024 aa8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 LUC7L2Q9Y383 392 aaKnown RBP8.77□□□□□ -1.01
ATP2C1-208ENST00000504948 KCNQ3O43525 872 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 USO1O60763 962 aaKnown RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 SEC24CP53992 1094 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 SF3B2Q13435 895 aaKnown RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 SRGAP1Q7Z6B7 1085 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 SPDL1Q96EA4 605 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 LSG1Q9H089 658 aaKnown RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 BRMS1Q9HCU9 246 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 FAM114A2Q9NRY5 505 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 EID1Q9Y6B2 187 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 A0A087WUV0 522 aaPredicted RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 B4E1Z4 1266 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 H0Y3Z8 333 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 PRDM1O75626 825 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 TBC1D8O95759 1140 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 XBP1P17861 261 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 POLE2P56282 527 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 SEPT7Q16181 437 aaKnown RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 TBC1D1Q86TI0 1168 aaPredicted RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 RABGGTAQ92696 567 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 EAF2Q96CJ1 260 aaPredicted RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 PTPRCP08575 1304 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 TADA3O75528 432 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 MCM7P33993 719 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 GUCY1A3Q02108 690 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 PLA2G4DQ86XP0 818 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 NOA1Q8NC60 698 aaKnown RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 OPA1O60313 960 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 PDHA1P08559 390 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 PAX7P23759 505 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 GUCY2CP25092 1073 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 NLRP12P59046 1061 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 TYW1BQ6NUM6 668 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 ANKRD42Q8N9B4 389 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 CCDC43Q96MW1 224 aaKnown RBP8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 DPH5Q9H2P9 285 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
ATP2C1-208ENST00000504948 KRT13P13646 458 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 PSME1Q06323 249 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 RBL2Q08999 1139 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 LMBR1LQ6UX01 489 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 EFCAB13Q8IY85 973 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 NAPBQ9H115 298 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 TEX33O43247 280 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 KRT86O43790 486 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 GJC1P36383 396 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 SLCO1A2P46721 670 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 HDGFP51858 240 aaKnown RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 PSMD2Q13200 908 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 KRT71Q3SY84 523 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 NUTM2AQ8IVF1 878 aaPredicted RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 SMARCC2Q8TAQ2 1214 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 ZBTB10Q96DT7 871 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 BRCA1P38398 1863 aaKnown RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 A0A0U1RQJ8 604 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 ONECUT3O60422 494 aaPredicted RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 GUCY2DQ02846 1103 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 DZIP3Q86Y13 1208 aaKnown RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 CDC23Q9UJX2 597 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 OVOS2A0A0J9YW53 1432 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 OVOS2Q6IE36 1432 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 CCDC151A5D8V7 595 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 ZNF185O15231 689 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 ZNF853P0CG23 659 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 SSRP1Q08945 709 aaKnown RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 BRD3Q15059 726 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 CCDC57Q2TAC2 916 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 CAPN12Q6ZSI9 719 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 MIGA1Q8NAN2 632 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 DDX17Q92841 729 aaKnown RBP8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 TBC1D2BQ9UPU7 963 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 SAR1BQ9Y6B6 198 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 SLC4A4Q9Y6R1 1079 aa8.75□□□□□ -1.01
ATP2C1-208ENST00000504948 PPFIA4O75335 1185 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 MCMDC2Q4G0Z9 681 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 JAKMIP2Q96AA8 810 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 TRIM6Q9C030 488 aaPredicted RBP8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 KAT14Q9H8E8 782 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 C5P01031 1676 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 ZBTB43O43298 467 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 NEDD9Q14511 834 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
ATP2C1-208ENST00000504948 POTEDQ86YR6 584 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms