RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 PDCLQ13371 301 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 NBPF5PQ86XG9 351 aaPredicted RBP9.68□□□□□ -0.86
CCDC149-204ENST00000504487 SUGP1Q8IWZ8 645 aaKnown RBP9.68□□□□□ -0.86
CCDC149-204ENST00000504487 JAKMIP2Q96AA8 810 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC149-204ENST00000504487 USP21Q9UK80 565 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 EPN1Q9Y6I3 576 aaPredicted RBP9.68□□□□□ -0.86
CCDC149-204ENST00000504487 MINDY4BA8MYZ0 360 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 KIF1CO43896 1103 aaKnown RBP9.68□□□□□ -0.86
CCDC149-204ENST00000504487 IRAK1P51617 712 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 MRPS25P82663 173 aaKnown RBP9.68□□□□□ -0.86
CCDC149-204ENST00000504487 PDE4BQ07343 736 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 IFT88Q13099 833 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 E2F5Q15329 346 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 MSANTD4Q8NCY6 345 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 COG1Q8WTW3 980 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
CCDC149-204ENST00000504487 KIFC2Q96AC6 838 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 MYL10Q9BUA6 226 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 SELENOOQ9BVL4 669 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 MYO3AQ8NEV4 1616 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 SHC4Q6S5L8 630 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 CCDC51Q96ER9 411 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 SLC24A3Q9HC58 644 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 HDAC6Q9UBN7 1215 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 KIF28PB7ZC32 967 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 E7EVH7 732 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 IRS4O14654 1257 aaPredicted RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 CHUKO15111 745 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 PPP6R2O75170 966 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 PLCD1P51178 756 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 ACTN3Q08043 901 aaPredicted RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 SPATA1Q5VX52 437 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 SMYD4Q8IYR2 804 aaPredicted RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 PPANQ9NQ55 473 aaKnown RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 TUBE1Q9UJT0 475 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 SPATA31A3Q5VYP0 1347 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 CD163L1Q9NR16 1453 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 A6NNZ2 444 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 MFAP3LO75121 409 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 TACC1O75410 805 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 RPSAP08865 295 aaKnown RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 PRR29P0C7W0 189 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 BRD2P25440 801 aaKnown RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 TUBB8Q3ZCM7 444 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 SLC9C2Q5TAH2 1124 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 METTL16Q86W50 562 aaKnown RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 DIS3L2Q8IYB7 885 aaKnown RBP9.67□□□□□ -0.86
CCDC149-204ENST00000504487 RPGRIP1Q96KN7 1286 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 POLD4Q9HCU8 107 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 RAB21Q9UL25 225 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 MROH1Q8NDA8 1641 aa9.67□□□□□ -0.86
CCDC149-204ENST00000504487 MYO1FO00160 1098 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 HOXB7P09629 217 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 FDPSP14324 419 aaKnown RBP9.66□□□□□ -0.86
CCDC149-204ENST00000504487 USP14P54578 494 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 FMR1Q06787 632 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCDC149-204ENST00000504487 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 HAUS7Q99871 368 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 HAUS4Q9H6D7 363 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 MYO1AQ9UBC5 1043 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
CCDC149-204ENST00000504487 GCKRQ14397 625 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 NBPF14Q5TI25 921 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 ALS2CR12Q96Q35 445 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 UBXN6Q9BZV1 441 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 DONSONQ9NYP3 566 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 HPCAL4Q9UM19 191 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 KCNJ14Q9UNX9 436 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 MED23Q9ULK4 1368 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 AKR1B10O60218 316 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 RPS6KA5O75582 802 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 USP5P45974 858 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 C2orf54Q08AI8 447 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 FMNL3Q8IVF7 1028 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 RSRC1Q96IZ7 334 aaKnown RBP9.66□□□□□ -0.86
CCDC149-204ENST00000504487 CCDC42Q96M95 316 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 CABP5Q9NP86 173 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 ANGEL1Q9UNK9 670 aaKnown RBP9.66□□□□□ -0.86
CCDC149-204ENST00000504487 MROH7-TTC4A0A0A0MT08 1334 aa9.66□□□□□ -0.86
CCDC149-204ENST00000504487 BTBD18B2RXH4 712 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 RBM5P52756 815 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC149-204ENST00000504487 SF3A3Q12874 501 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC149-204ENST00000504487 C8orf74Q6P047 294 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 OR8K1Q8NGG5 319 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 TRIM47Q96LD4 638 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 METTL22Q9BUU2 404 aaPredicted RBP9.65□□□□□ -0.86
CCDC149-204ENST00000504487 TEX13AQ9BXU3 409 aaPredicted RBP9.65□□□□□ -0.86
CCDC149-204ENST00000504487 VIPAS39Q9H9C1 493 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 ZBTB1Q9Y2K1 713 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
CCDC149-204ENST00000504487 PREX1Q8TCU6 1659 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms