RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PPFIA3O75145 1194 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 TMEM127O75204 238 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 GRM5P41594 1212 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 LDHAL6AQ6ZMR3 332 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 RSRC2Q7L4I2 434 aaKnown RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 KRT25Q7Z3Z0 450 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 PAWRQ96IZ0 340 aaKnown RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 ALG13Q9NP73 1137 aaKnown RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 CRTAC1Q9NQ79 661 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 RRN3Q9NYV6 651 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 PCDHB14Q9Y5E9 798 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 SLC4A7Q9Y6M7 1214 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 TSPY2A6NKD2 308 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 M0R2C6 588 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 GFPT2O94808 682 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 GNRH1P01148 92 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 TSPY3P0CV98 308 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 TSPY8P0CW00 308 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 MYBL2P10244 700 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 MMP14P50281 582 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 TSPY1Q01534 308 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 SAFBQ15424 915 aaKnown RBP eCLIP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 KIAA1614Q5VZ46 1190 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 CMIPQ8IY22 773 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 STAC3Q96MF2 364 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 LTBP3Q9NS15 1303 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 FAM221AA4D161 298 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 NR3C2P08235 984 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 PLA2G4AP47712 749 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 PPP2R5CQ13362 524 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 NBPF8Q3BBV2 869 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 EGFL6Q8IUX8 553 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 MRPL50Q8N5N7 158 aaKnown RBP6.26□□□□□ -1.41
NIPBL-204ENST00000504430 NAA15Q9BXJ9 866 aaKnown RBP6.26□□□□□ -1.41
NIPBL-204ENST00000504430 SYNDIG1LA6NDD5 238 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 CDK2AP1O14519 115 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 WDR45BQ5MNZ6 344 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 AGMOQ6ZNB7 445 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 IFNL2Q8IZJ0 200 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.26□□□□□ -1.41
NIPBL-204ENST00000504430 BHMG1C9JSJ3 638 aaPredicted RBP6.26□□□□□ -1.41
NIPBL-204ENST00000504430 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
NIPBL-204ENST00000504430 IL33O95760 270 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 FLT3P36888 993 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 PHKA2P46019 1235 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 SKOR1P84550 965 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 FAAP100Q0VG06 881 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 E2F5Q15329 346 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 CWF19L2Q2TBE0 894 aaKnown RBP6.26□□□□□ -1.41
NIPBL-204ENST00000504430 ARHGAP29Q52LW3 1261 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 ZC3H12AQ5D1E8 599 aaKnown RBP6.26□□□□□ -1.41
NIPBL-204ENST00000504430 VHLLQ6RSH7 139 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 TOGARAM2Q6ZUX3 1019 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 CDHR1Q96JP9 859 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 EFCC1Q9HA90 598 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 TMCC3Q9ULS5 477 aa6.26□□□□□ -1.41
NIPBL-204ENST00000504430 MEN1O00255 615 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 ECEL1O95672 775 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 JMJD7P0C870 316 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 UBA7P41226 1012 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 TEAD4Q15561 434 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 MSL1Q68DK7 614 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 CYB5RLQ6IPT4 315 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 SYDE1Q6ZW31 735 aaPredicted RBP6.25□□□□□ -1.41
NIPBL-204ENST00000504430 GRIN3AQ8TCU5 1115 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 CDC6Q99741 560 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 BLOC1S4Q9NUP1 217 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 A6NNZ2 444 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 ARHGAP33O14559 1287 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 GABBR2O75899 941 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 S1PR4O95977 384 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 CAPN3P20807 821 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 CENPCQ03188 943 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 PCBP2Q15366 365 aaKnown RBP eCLIP6.25□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF449Q6P9G9 518 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 NKAPQ8N5F7 415 aaKnown RBP6.25□□□□□ -1.41
NIPBL-204ENST00000504430 ST13P5Q8NFI4 369 aaPredicted RBP6.25□□□□□ -1.41
NIPBL-204ENST00000504430 GATAD2BQ8WXI9 593 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 SUSD3Q96L08 255 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 ESYT1Q9BSJ8 1104 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 AP1M1Q9BXS5 423 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 SMOC1Q9H4F8 434 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 ARHGEF4Q9NR80 690 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 MAPRE3Q9UPY8 281 aa6.25□□□□□ -1.41
NIPBL-204ENST00000504430 TNPO3Q9Y5L0 923 aaKnown RBP6.25□□□□□ -1.41
NIPBL-204ENST00000504430 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
NIPBL-204ENST00000504430 BLACEA4D250 179 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 TBX1O43435 398 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 TIPRLO75663 272 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 MBD4O95243 580 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 CD4P01730 458 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 IFIT1P09914 478 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 ACRP10323 421 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 RXRGP48443 463 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 NRLP54845 237 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 SLC6A19Q695T7 634 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 HEATR6Q6AI08 1181 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 MZT2AQ6P582 158 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 GJA10Q969M2 543 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms