RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ANGPTL3Q9Y5C1 460 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC160A6NGH7 325 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 MMEP08473 750 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 NCAPH2Q6IBW4 605 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 PRPF40BQ6NWY9 871 aaKnown RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 PARP9Q8IXQ6 854 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 EIF1ADQ8N9N8 165 aaKnown RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 KLHDC4Q8TBB5 520 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 DDI1Q8WTU0 396 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 TMEM60Q9H2L4 133 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CDC42BPBQ9Y5S2 1711 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 GOLGA8TH3BQL2 631 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 GOLGA8HP0CJ92 632 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 S100A1P23297 94 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 NFE2L2Q16236 605 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 NEK10Q6ZWH5 1172 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 ITSN1Q15811 1721 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CCDC188H7C350 402 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 IL9RQ01113 521 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 FGD4Q96M96 766 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 FOXP3Q9BZS1 431 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 OSBPL5Q9H0X9 879 aaPredicted RBP6.72□□□□□ -1.33
LINC02397-201ENST00000504409 DCTPP1Q9H773 170 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 KLC4Q9NSK0 619 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 HYOU1Q9Y4L1 999 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 VCAM1P19320 739 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 STRN3Q13033 797 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 TMEM259Q4ZIN3 620 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 SEL1L2Q5TEA6 688 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 SYT10Q6XYQ8 523 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 ARHGEF25Q86VW2 580 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 CALML4Q96GE6 196 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 FAM204AQ9H8W3 233 aa6.72□□□□□ -1.33
LINC02397-201ENST00000504409 MYO5CQ9NQX4 1742 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 PYGBP11216 843 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 PTGS1P23219 599 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 SNX16P57768 344 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 NLRP12P59046 1061 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 LONRF2Q1L5Z9 754 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 RGL1Q9NZL6 768 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 ADAM21Q9UKJ8 722 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 NUTM2BA6NNL0 878 aaPredicted RBP6.71□□□□□ -1.33
LINC02397-201ENST00000504409 NUTM2EB1AL46 878 aaPredicted RBP6.71□□□□□ -1.33
LINC02397-201ENST00000504409 ARHGEF9O43307 516 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 STK10O94804 968 aaKnown RBP6.71□□□□□ -1.33
LINC02397-201ENST00000504409 SMTNP53814 917 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 KLC1Q07866 573 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 HELBQ8NG08 1087 aaPredicted RBP6.71□□□□□ -1.33
LINC02397-201ENST00000504409 HOMER2Q9NSB8 354 aa6.71□□□□□ -1.33
LINC02397-201ENST00000504409 N4BP3O15049 544 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 AKR1B10O60218 316 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 HDDC2Q7Z4H3 204 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 TRPM1Q7Z4N2 1603 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 SERPINI2O75830 405 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 CCDC89Q8N998 374 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 APBB2Q92870 758 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 JPH2Q9BR39 696 aaPredicted RBP6.71□□□□□ -1.34
LINC02397-201ENST00000504409 POTEFA5A3E0 1075 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 MEFVO15553 781 aaPredicted RBP6.71□□□□□ -1.34
LINC02397-201ENST00000504409 POTEIP0CG38 1075 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 GNAQP50148 359 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 POTEEQ6S8J3 1075 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 UBAC1Q9BSL1 405 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 CD209Q9NNX6 404 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 MAP3K15Q6ZN16 1313 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 PITPNM2Q9BZ72 1349 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 GNAT2P19087 354 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 VSIG1Q86XK7 387 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 SNX29Q8TEQ0 813 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 ESYT1Q9BSJ8 1104 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 KIAA0232Q92628 1395 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 MSL3P1P0C860 447 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 TTKP33981 857 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 DDR1Q08345 913 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 ANKRD20A3Q5VUR7 823 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 SPATA1Q5VX52 437 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 SIKE1Q9BRV8 207 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 COPG1Q9Y678 874 aaKnown RBP6.71□□□□□ -1.34
LINC02397-201ENST00000504409 DIAPH2O60879 1101 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 KRT6CP48668 564 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 BASP1P80723 227 aaKnown RBP6.71□□□□□ -1.34
LINC02397-201ENST00000504409 ARHGAP4P98171 946 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 CUL4BQ13620 913 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 TRIM60Q495X7 471 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 SLC17A8Q8NDX2 589 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 USP40Q9NVE5 1235 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 GRIN2AQ12879 1464 aa6.71□□□□□ -1.34
LINC02397-201ENST00000504409 IDEP14735 1019 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 HDGFL1Q5TGJ6 251 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 PAWRQ96IZ0 340 aaKnown RBP6.7□□□□□ -1.34
LINC02397-201ENST00000504409 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.7□□□□□ -1.34
LINC02397-201ENST00000504409 KIAA0586Q9BVV6 1533 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 CEP170Q5SW79 1584 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 LAMB3Q13751 1172 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 PPP1R14CQ8TAE6 165 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 SEPT8Q92599 483 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 MTRQ99707 1265 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 ATP10DQ9P241 1426 aa6.7□□□□□ -1.34
LINC02397-201ENST00000504409 XPOTO43592 962 aaKnown RBP6.7□□□□□ -1.34
LINC02397-201ENST00000504409 CUTAO60888 179 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms