RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 FSIP1Q8NA03 581 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 SEC14L1Q92503 715 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 CCDC51Q96ER9 411 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 ACSBG1Q96GR2 724 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 RALGAPA2Q2PPJ7 1873 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 MFAP3LO75121 409 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 PCP11498 1178 aaKnown RBP7.34□□□□□ -1.23
COPB2-204ENST00000504295 TROAPQ12815 778 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 PPP2R5BQ15173 497 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 GORABQ5T7V8 394 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
COPB2-204ENST00000504295 INTS5Q6P9B9 1019 aaKnown RBP7.34□□□□□ -1.23
COPB2-204ENST00000504295 FERMT3Q86UX7 667 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 CEP57L1Q8IYX8 460 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 CRACR2BQ8N4Y2 399 aaPredicted RBP7.34□□□□□ -1.23
COPB2-204ENST00000504295 AENQ8WTP8 325 aaKnown RBP7.34□□□□□ -1.23
COPB2-204ENST00000504295 FOXD4L4Q8WXT5 416 aaPredicted RBP7.34□□□□□ -1.23
COPB2-204ENST00000504295 CAMKK2Q96RR4 588 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 STK32BQ9NY57 414 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 FEZ2Q9UHY8 353 aaPredicted RBP7.34□□□□□ -1.23
COPB2-204ENST00000504295 KAT6BQ8WYB5 2073 aa7.34□□□□□ -1.23
COPB2-204ENST00000504295 PJA2O43164 708 aa7.34□□□□□ -1.24
COPB2-204ENST00000504295 SLC39A6Q13433 755 aa7.34□□□□□ -1.24
COPB2-204ENST00000504295 DDX46Q7L014 1031 aaKnown RBP7.34□□□□□ -1.24
COPB2-204ENST00000504295 NOSTRINQ8IVI9 506 aa7.34□□□□□ -1.24
COPB2-204ENST00000504295 FLAD1Q8NFF5 587 aa7.34□□□□□ -1.24
COPB2-204ENST00000504295 NECTIN2Q92692 538 aa7.34□□□□□ -1.24
COPB2-204ENST00000504295 GJB4Q9NTQ9 266 aa7.34□□□□□ -1.24
COPB2-204ENST00000504295 PRC1O43663 620 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 ORC4O43929 436 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 NTSR2O95665 410 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 PRLRP16471 622 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 TUBB4BP68371 445 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 BRD3Q15059 726 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 MIIPQ5JXC2 388 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 FAM182BQ5T319 152 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 KRT40Q6A162 431 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 RCSD1Q6JBY9 416 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 MLKLQ8NB16 471 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 RNF26Q9BY78 433 aaPredicted RBP7.33□□□□□ -1.24
COPB2-204ENST00000504295 PTPRFP10586 1907 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 A0A1B0GVL5 298 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 GPAA1O43292 621 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 ABL1P00519 1130 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
COPB2-204ENST00000504295 HERVK_113P62684 666 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 KCNB1Q14721 858 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 CRYGNQ8WXF5 182 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 TCP11L1Q9NUJ3 509 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
COPB2-204ENST00000504295 IFNKQ9P0W0 207 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 MROH5Q6ZUA9 1318 aa7.33□□□□□ -1.24
COPB2-204ENST00000504295 COL11A1P12107 1806 aaPredicted RBP7.33□□□□□ -1.24
COPB2-204ENST00000504295 GOLGA6L9A6NEM1 432 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 BTNL10A8MVZ5 291 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 PRPF3O43395 683 aaKnown RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 APPP05067 770 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 ECHS1P30084 290 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 HOXA7P31268 230 aaPredicted RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 CTSWP56202 376 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 CBX1P83916 185 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 EN1Q05925 392 aaPredicted RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 PTPN14Q15678 1187 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 ERCC6LQ2NKX8 1250 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 TTC5Q8N0Z6 440 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 VPS37CA5D8V6 355 aaPredicted RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 SLC5A1P13866 664 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 TXLNAP40222 546 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 ZAP70P43403 619 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 EIF5P55010 431 aaKnown RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 TXNRD1Q16881 649 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 SBK1Q52WX2 424 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 SLC9C2Q5TAH2 1124 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 MREGQ8N565 214 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 AIFM3Q96NN9 605 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 TXLNGYQ9BZA5 131 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 TSC2P49815 1807 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 PDE8BO95263 885 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 SF3A1Q15459 793 aaKnown RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 TNFAIP8L3Q5GJ75 292 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 SLC10A5Q5PT55 438 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 EIF1ADQ8N9N8 165 aaKnown RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 PIK3R5Q8WYR1 880 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 BRIP1Q9BX63 1249 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 KBTBD4Q9NVX7 518 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 PCDHA5Q9Y5H7 936 aa7.32□□□□□ -1.24
COPB2-204ENST00000504295 V9GYY5 206 aaPredicted RBP7.32□□□□□ -1.24
COPB2-204ENST00000504295 PATL2C9JE40 543 aaKnown RBP7.31□□□□□ -1.24
COPB2-204ENST00000504295 PDE6AP16499 860 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 PNOCQ13519 176 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 ZCWPW2Q504Y3 356 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 SPECC1LQ69YQ0 1117 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 SPC24Q8NBT2 197 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 NCOA7Q8NI08 942 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 SMARCE1Q969G3 411 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 SYT11Q9BT88 431 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 A0A087WZG4 1122 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 CCP110O43303 1012 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 FNTAP49354 379 aa7.31□□□□□ -1.24
COPB2-204ENST00000504295 ST5P78524 1137 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms