RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 PLEKHA8P1O95397 391 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 KIF5BP33176 963 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 KIF23Q02241 960 aaPredicted RBP11.88□□□□□ -0.51
CDK7-203ENST00000504147 BRAPQ7Z569 592 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 GMLQ99445 158 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 RNF26Q9BY78 433 aaPredicted RBP11.88□□□□□ -0.51
CDK7-203ENST00000504147 SWAP70Q9UH65 585 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 RCOR1Q9UKL0 485 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
CDK7-203ENST00000504147 GOLGA6L3A6NEY3 463 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 KIF28PB7ZC32 967 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 PTGER2P43116 358 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 CACNB3P54284 484 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 ZSCAN23Q3MJ62 389 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
CDK7-203ENST00000504147 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 SYAP1Q96A49 352 aaPredicted RBP11.87□□□□□ -0.51
CDK7-203ENST00000504147 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
CDK7-203ENST00000504147 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 DHX36Q9H2U1 1008 aaKnown RBP11.87□□□□□ -0.51
CDK7-203ENST00000504147 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
CDK7-203ENST00000504147 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 SERPINB13Q9UIV8 391 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
CDK7-203ENST00000504147 CHD4Q14839 1912 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 MYH2Q9UKX2 1941 aa11.87□□□□□ -0.51
CDK7-203ENST00000504147 BAZ2AQ9UIF9 1905 aaKnown RBP11.86□□□□□ -0.51
CDK7-203ENST00000504147 FSD2A1L4K1 749 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
CDK7-203ENST00000504147 SHMT1P34896 483 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 NOVP48745 357 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 GNAQP50148 359 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 ZNF445P59923 1031 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 CEBPZQ03701 1054 aaKnown RBP11.86□□□□□ -0.51
CDK7-203ENST00000504147 TCP10Q12799 353 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
CDK7-203ENST00000504147 GRM4Q14833 912 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 SAFBQ15424 915 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK7-203ENST00000504147 PKN1Q16512 942 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 AGBL3Q8NEM8 1001 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 USP28Q96RU2 1077 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK7-203ENST00000504147 EHD4Q9H223 541 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 STX8Q9UNK0 236 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
CDK7-203ENST00000504147 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 DDTLA6NHG4 134 aaPredicted RBP11.85□□□□□ -0.51
CDK7-203ENST00000504147 ENTPD3O75355 529 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 MMP1P03956 469 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 AKR1B1P15121 316 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 XBP1P17861 261 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK7-203ENST00000504147 CXCL9Q07325 125 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 DLGAP5Q15398 846 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 SH3BP5LQ7L8J4 393 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
CDK7-203ENST00000504147 OGFOD1Q8N543 542 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 JDP2Q8WYK2 163 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 CEP95Q96GE4 821 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 PI4KBQ9UBF8 816 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
CDK7-203ENST00000504147 KCNJ14Q9UNX9 436 aa11.85□□□□□ -0.51
CDK7-203ENST00000504147 hCG_1642624A0A1W2PR95 340 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
CDK7-203ENST00000504147 NFKBIEO00221 500 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 CCDC183Q5T5S1 534 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
CDK7-203ENST00000504147 CIAPIN1Q6FI81 312 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 ZSCAN29Q8IWY8 852 aaPredicted RBP11.84□□□□□ -0.51
CDK7-203ENST00000504147 PGBD1Q96JS3 809 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 CCDC17Q96LX7 622 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDK7-203ENST00000504147 MTMR4Q9NYA4 1195 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 ZNF70Q9UC06 446 aaPredicted RBP11.84□□□□□ -0.51
CDK7-203ENST00000504147 MAD2L2Q9UI95 211 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 CLIC4Q9Y696 253 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 LAMB1P07942 1786 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 CNTNAP5Q8WYK1 1306 aa11.84□□□□□ -0.51
CDK7-203ENST00000504147 PLIN4Q96Q06 1357 aa11.83□□□□□ -0.52
CDK7-203ENST00000504147 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
CDK7-203ENST00000504147 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
CDK7-203ENST00000504147 NASPP49321 788 aaPredicted RBP11.83□□□□□ -0.52
CDK7-203ENST00000504147 TNIP1Q15025 636 aa11.83□□□□□ -0.52
CDK7-203ENST00000504147 PPP4R3BQ5MIZ7 849 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms