RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 ADGRA2Q96PE1 1338 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 HIP1O00291 1037 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 ZYXQ15942 572 aaKnown RBP24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 C17orf99Q6UX52 265 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 FEZ1Q99689 392 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 MCOLN1Q9GZU1 580 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 MKNK2Q9HBH9 465 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 EMILIN3Q9NT22 766 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 CPA4Q9UI42 421 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 ZSWIM8A7E2V4 1837 aa24.62■■□□□ 1.53
PDGFRA-203ENST00000503856 HSPD1P10809 573 aaKnown RBP24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 RASA1P20936 1047 aa24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 PPARAQ07869 468 aa24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 ALX1Q15699 326 aa24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 USP17L2Q6R6M4 530 aa24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 SKAP1Q86WV1 359 aa24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 CLEC10AQ8IUN9 316 aa24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 CD99L2Q8TCZ2 262 aa24.61■■□□□ 1.53
PDGFRA-203ENST00000503856 MGAMO43451 1857 aa24.6■■□□□ 1.53
PDGFRA-203ENST00000503856 ERO1AQ96HE7 468 aa24.6■■□□□ 1.53
PDGFRA-203ENST00000503856 KIAA1683Q9H0B3 1180 aa24.6■■□□□ 1.53
PDGFRA-203ENST00000503856 MYH4Q9Y623 1939 aa24.6■■□□□ 1.53
PDGFRA-203ENST00000503856 A0A1W2PRG0 241 aa24.59■■□□□ 1.53
PDGFRA-203ENST00000503856 PRDM1O75626 825 aa24.59■■□□□ 1.53
PDGFRA-203ENST00000503856 FGAP02671 866 aa24.59■■□□□ 1.53
PDGFRA-203ENST00000503856 MFAP1P55081 439 aaKnown RBP24.59■■□□□ 1.53
PDGFRA-203ENST00000503856 CAP1Q01518 475 aa24.59■■□□□ 1.53
PDGFRA-203ENST00000503856 PABPC4Q13310 644 aaKnown RBP eCLIP24.59■■□□□ 1.53
PDGFRA-203ENST00000503856 DOCK3Q8IZD9 2030 aa24.59■■□□□ 1.53
PDGFRA-203ENST00000503856 USP14P54578 494 aa24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 ICA1Q05084 483 aa24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 CTDSPL2Q05D32 466 aa24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 SIAH1Q8IUQ4 282 aa24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 SMCR8Q8TEV9 937 aaPredicted RBP24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 C12orf42Q96LP6 360 aa24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 ASCC2Q9H1I8 757 aaPredicted RBP24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 PNMA3Q9UL41 463 aa24.58■■□□□ 1.53
PDGFRA-203ENST00000503856 SLC3A2P08195 630 aaKnown RBP24.57■■□□□ 1.52
PDGFRA-203ENST00000503856 BCRP11274 1271 aa24.57■■□□□ 1.52
PDGFRA-203ENST00000503856 OSBPP22059 807 aa24.57■■□□□ 1.52
PDGFRA-203ENST00000503856 HOXA7P31268 230 aaPredicted RBP24.57■■□□□ 1.52
PDGFRA-203ENST00000503856 ZNF287Q9HBT7 754 aa24.57■■□□□ 1.52
PDGFRA-203ENST00000503856 LACTBP83111 547 aaPredicted RBP24.56■■□□□ 1.52
PDGFRA-203ENST00000503856 PDE4BQ07343 736 aa24.56■■□□□ 1.52
PDGFRA-203ENST00000503856 OTOP1Q7RTM1 612 aa24.56■■□□□ 1.52
PDGFRA-203ENST00000503856 ZNF444Q8N0Y2 327 aaPredicted RBP24.56■■□□□ 1.52
PDGFRA-203ENST00000503856 KANSL2Q9H9L4 492 aa24.56■■□□□ 1.52
PDGFRA-203ENST00000503856 TRIM17Q9Y577 477 aa24.56■■□□□ 1.52
PDGFRA-203ENST00000503856 ECM2O94769 699 aaPredicted RBP24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 IRX3P78415 501 aaPredicted RBP24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 ARHGAP39Q9C0H5 1083 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 IL25Q9H293 177 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 EFCC1Q9HA90 598 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 ARHGEF10LQ9HCE6 1279 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 INCENPQ9NQS7 918 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 ANAPC4Q9UJX5 808 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 TACC3Q9Y6A5 838 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 ZMYM6O95789 1325 aa24.55■■□□□ 1.52
PDGFRA-203ENST00000503856 EEF2P13639 858 aaKnown RBP24.54■■□□□ 1.52
PDGFRA-203ENST00000503856 CHMLP26374 656 aa24.54■■□□□ 1.52
PDGFRA-203ENST00000503856 ATP2B2Q01814 1243 aa24.54■■□□□ 1.52
PDGFRA-203ENST00000503856 ABHD8Q96I13 439 aa24.54■■□□□ 1.52
PDGFRA-203ENST00000503856 P2RX7Q99572 595 aaKnown RBP24.54■■□□□ 1.52
PDGFRA-203ENST00000503856 LAMA4Q16363 1823 aa24.54■■□□□ 1.52
PDGFRA-203ENST00000503856 VCAM1P19320 739 aa24.53■■□□□ 1.52
PDGFRA-203ENST00000503856 KIF22Q14807 665 aa24.53■■□□□ 1.52
PDGFRA-203ENST00000503856 PKN2Q16513 984 aaKnown RBP24.53■■□□□ 1.52
PDGFRA-203ENST00000503856 KIAA1755Q5JYT7 1200 aa24.53■■□□□ 1.52
PDGFRA-203ENST00000503856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.53■■□□□ 1.52
PDGFRA-203ENST00000503856 TMX2Q9Y320 296 aa24.53■■□□□ 1.52
PDGFRA-203ENST00000503856 CTGFP29279 349 aa24.52■■□□□ 1.52
PDGFRA-203ENST00000503856 GCLCP48506 637 aaPredicted RBP24.52■■□□□ 1.52
PDGFRA-203ENST00000503856 HAND2P61296 217 aa24.52■■□□□ 1.52
PDGFRA-203ENST00000503856 FAM47AQ5JRC9 791 aa24.52■■□□□ 1.52
PDGFRA-203ENST00000503856 ANKRD13CQ8N6S4 541 aa24.52■■□□□ 1.52
PDGFRA-203ENST00000503856 SH2D4AQ9H788 454 aa24.52■■□□□ 1.52
PDGFRA-203ENST00000503856 RLFQ13129 1914 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L15C9J2P7 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L13C9JLJ4 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L11C9JVI0 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L18D6R9N7 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L22D6RA61 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L17D6RBQ6 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L19D6RCP7 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L20D6RJB6 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 TFAP4Q01664 338 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 USP17L24Q0WX57 530 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 ARHGEF6Q15052 776 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 CATSPERGQ6ZRH7 1159 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 RUFY2Q8WXA3 655 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 VCPKMTQ9H867 229 aa24.51■■□□□ 1.51
PDGFRA-203ENST00000503856 PARP14Q460N5 1801 aa24.5■■□□□ 1.51
PDGFRA-203ENST00000503856 IGKV6D-41A0A0C4DH26 115 aa24.5■■□□□ 1.51
PDGFRA-203ENST00000503856 TSPY3P0CV98 308 aa24.5■■□□□ 1.51
PDGFRA-203ENST00000503856 TSPY8P0CW00 308 aa24.5■■□□□ 1.51
PDGFRA-203ENST00000503856 PSMC4P43686 418 aa24.5■■□□□ 1.51
PDGFRA-203ENST00000503856 HERVK_113P62684 666 aa24.5■■□□□ 1.51
PDGFRA-203ENST00000503856 FBXO46Q6PJ61 603 aaPredicted RBP24.5■■□□□ 1.51
PDGFRA-203ENST00000503856 NEDD1Q8NHV4 660 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms