RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 GJB1P08034 283 aa23.43■■□□□ 1.34
UBE2D3-215ENST00000503418 GUCY1A2P33402 732 aa23.43■■□□□ 1.34
UBE2D3-215ENST00000503418 GJA8P48165 433 aa23.43■■□□□ 1.34
UBE2D3-215ENST00000503418 SEPT2Q15019 361 aa23.43■■□□□ 1.34
UBE2D3-215ENST00000503418 TSHZ3Q63HK5 1081 aa23.43■■□□□ 1.34
UBE2D3-215ENST00000503418 KIAA1683Q9H0B3 1180 aa23.43■■□□□ 1.34
UBE2D3-215ENST00000503418 ATP8A2Q9NTI2 1148 aa23.43■■□□□ 1.34
UBE2D3-215ENST00000503418 RRP1P56182 461 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-215ENST00000503418 GTF3C2Q8WUA4 911 aaPredicted RBP23.42■■□□□ 1.34
UBE2D3-215ENST00000503418 DYNLL2Q96FJ2 89 aa23.42■■□□□ 1.34
UBE2D3-215ENST00000503418 DDRGK1Q96HY6 314 aa23.42■■□□□ 1.34
UBE2D3-215ENST00000503418 SLC4A4Q9Y6R1 1079 aa23.42■■□□□ 1.34
UBE2D3-215ENST00000503418 PLXNB2O15031 1838 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L15C9J2P7 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L13C9JLJ4 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L11C9JVI0 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L18D6R9N7 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L22D6RA61 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L17D6RBQ6 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L19D6RCP7 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L20D6RJB6 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 VCAM1P19320 739 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 ERVK-9P63128 1117 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 ERVK-24P63145 666 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 USP17L24Q0WX57 530 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 CCAR1Q8IX12 1150 aaKnown RBP23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 AMOTL1Q8IY63 956 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 PUS7LQ9H0K6 701 aaKnown RBP23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 RBPJLQ9UBG7 517 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 SWAP70Q9UH65 585 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 PCDHB15Q9Y5E8 787 aa23.41■■□□□ 1.34
UBE2D3-215ENST00000503418 U2AF1L4Q8WU68 220 aaKnown RBP23.4■■□□□ 1.34
UBE2D3-215ENST00000503418 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
UBE2D3-215ENST00000503418 GJD2Q9UKL4 321 aa23.4■■□□□ 1.34
UBE2D3-215ENST00000503418 CYP2D7A0A087X1C5 515 aa23.39■■□□□ 1.33
UBE2D3-215ENST00000503418 Q3C1V9 767 aa23.39■■□□□ 1.33
UBE2D3-215ENST00000503418 RPAP3Q9H6T3 665 aaPredicted RBP23.39■■□□□ 1.33
UBE2D3-215ENST00000503418 USP17L12C9JPN9 530 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 USP17L21D6R901 530 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 CYP2B6P20813 491 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 MAPK4P31152 587 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 C12orf60Q5U649 245 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 CATSPERGQ6ZRH7 1159 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 TMEM179Q6ZVK1 233 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 KBTBD3Q8NAB2 608 aa23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 CWC22Q9HCG8 908 aaKnown RBP23.38■■□□□ 1.33
UBE2D3-215ENST00000503418 SMIM22K7EJ46 135 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 SGPL1O95470 568 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 HMGCRP04035 888 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 AKR1B1P15121 316 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 POTEEQ6S8J3 1075 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 SOCS4Q8WXH5 440 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 DEFB118Q96PH6 123 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 NUDT12Q9BQG2 462 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 PORCNQ9H237 461 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 RABGAP1Q9Y3P9 1069 aa23.37■■□□□ 1.33
UBE2D3-215ENST00000503418 A0A1W2PRG0 241 aa23.36■■□□□ 1.33
UBE2D3-215ENST00000503418 SLC34A2O95436 690 aa23.36■■□□□ 1.33
UBE2D3-215ENST00000503418 CDK8P49336 464 aa23.36■■□□□ 1.33
UBE2D3-215ENST00000503418 FARP2O94887 1054 aaPredicted RBP23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 TFRCP02786 760 aaKnown RBP23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 TRIM32Q13049 653 aa23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 CTR9Q6PD62 1173 aa23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 GPR142Q7Z601 462 aa23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 CLEC10AQ8IUN9 316 aa23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 GCC1Q96CN9 775 aa23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 CRBNQ96SW2 442 aa23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.35■■□□□ 1.338e-9■■□□□ 13.6
UBE2D3-215ENST00000503418 PAK6Q9NQU5 681 aaPredicted RBP23.35■■□□□ 1.33
UBE2D3-215ENST00000503418 CNMDO75829 334 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 ICA1Q05084 483 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 WDR78Q5VTH9 848 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 C16orf86Q6ZW13 317 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 PLEKHH3Q7Z736 793 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 TRIB2Q92519 343 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 APPBP2Q92624 585 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 DPF3Q92784 378 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 OSBP2Q969R2 916 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 CCDC17Q96LX7 622 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 STRBPQ96SI9 672 aaKnown RBP23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 TANGO6Q9C0B7 1094 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 ARHGEF10LQ9HCE6 1279 aa23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 ARPP21Q9UBL0 812 aaPredicted RBP23.34■■□□□ 1.33
UBE2D3-215ENST00000503418 TTC41PQ6P2S7 1318 aa23.33■■□□□ 1.33
UBE2D3-215ENST00000503418 SPDYE16A6NNV3 312 aaPredicted RBP23.33■■□□□ 1.33
UBE2D3-215ENST00000503418 RNF113AO15541 343 aaKnown RBP23.33■■□□□ 1.33
UBE2D3-215ENST00000503418 CCNA1P78396 465 aa23.33■■□□□ 1.33
UBE2D3-215ENST00000503418 ERC2O15083 957 aa23.32■■□□□ 1.32
UBE2D3-215ENST00000503418 ZFYP08048 801 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-215ENST00000503418 LBX2Q6XYB7 198 aa23.32■■□□□ 1.32
UBE2D3-215ENST00000503418 UBE2Q1Q7Z7E8 422 aa23.32■■□□□ 1.32
UBE2D3-215ENST00000503418 OTUD7AQ8TE49 926 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-215ENST00000503418 HMX1Q9NP08 348 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-215ENST00000503418 BTBD7Q9P203 1132 aa23.32■■□□□ 1.32
UBE2D3-215ENST00000503418 ZKSCAN1P17029 563 aaPredicted RBP23.31■■□□□ 1.32
UBE2D3-215ENST00000503418 RGS2P41220 211 aa23.31■■□□□ 1.32
UBE2D3-215ENST00000503418 ATP2B2Q01814 1243 aa23.31■■□□□ 1.32
UBE2D3-215ENST00000503418 STK11IPQ8N1F8 1099 aa23.31■■□□□ 1.32
UBE2D3-215ENST00000503418 HTATIP2Q9BUP3 242 aa23.31■■□□□ 1.32
UBE2D3-215ENST00000503418 SH2D4AQ9H788 454 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms