RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 COX4I2Q96KJ9 171 aa6.93□□□□□ -1.3
PROM1-203ENST00000502943 ADAMTS20P59510 1910 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 TREHO43280 583 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 TPP2P29144 1249 aaPredicted RBP6.92□□□□□ -1.3
PROM1-203ENST00000502943 PLCB3Q01970 1234 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 GAB4Q2WGN9 574 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 PIWIL2Q8TC59 973 aaKnown RBP6.92□□□□□ -1.3
PROM1-203ENST00000502943 Q96M66 194 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 DUSP15Q9H1R2 295 aaPredicted RBP6.92□□□□□ -1.3
PROM1-203ENST00000502943 DCTN4Q9UJW0 460 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 SNCAIPQ9Y6H5 919 aa6.92□□□□□ -1.3
PROM1-203ENST00000502943 SOWAHDA6NJG2 315 aa6.91□□□□□ -1.3
PROM1-203ENST00000502943 ZGLP1P0C6A0 271 aa6.91□□□□□ -1.3
PROM1-203ENST00000502943 IRF2BP1Q8IU81 584 aa6.91□□□□□ -1.3
PROM1-203ENST00000502943 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
PROM1-203ENST00000502943 ANKRD24Q8TF21 1146 aa6.91□□□□□ -1.3
PROM1-203ENST00000502943 SGPP1Q9BX95 441 aa6.91□□□□□ -1.3
PROM1-203ENST00000502943 SLC6A17Q9H1V8 727 aa6.91□□□□□ -1.3
PROM1-203ENST00000502943 EGR3Q06889 387 aa6.9□□□□□ -1.3
PROM1-203ENST00000502943 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
PROM1-203ENST00000502943 TJP2Q9UDY2 1190 aa6.9□□□□□ -1.3
PROM1-203ENST00000502943 DUSP13Q9UII6 198 aa6.9□□□□□ -1.3
PROM1-203ENST00000502943 CNOT6Q9ULM6 557 aaKnown RBP6.9□□□□□ -1.3
PROM1-203ENST00000502943 TRIM13O60858 407 aa6.89□□□□□ -1.31
PROM1-203ENST00000502943 SEMA7AO75326 666 aa6.89□□□□□ -1.31
PROM1-203ENST00000502943 INTS4Q96HW7 963 aaKnown RBP6.89□□□□□ -1.31
PROM1-203ENST00000502943 BIN2Q9UBW5 565 aaPredicted RBP6.89□□□□□ -1.31
PROM1-203ENST00000502943 PEX10O60683 326 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 ETV3P41162 512 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 MAPK8P45983 427 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 NFIXQ14938 502 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 TCERG1LQ5VWI1 586 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 TMEM132EQ6IEE7 984 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 LILRA2Q8N149 483 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 MARCH10Q8NA82 808 aaPredicted RBP6.88□□□□□ -1.31
PROM1-203ENST00000502943 DNAJB8Q8NHS0 232 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 FBF1Q8TES7 1133 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 YBX2Q9Y2T7 364 aaKnown RBP6.88□□□□□ -1.31
PROM1-203ENST00000502943 KCTD3Q9Y597 815 aa6.88□□□□□ -1.31
PROM1-203ENST00000502943 TEX51A0A1B0GUA7 166 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 GFRA2O00451 464 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 SYN1P17600 705 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 MAPK1P28482 360 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 SEPT6Q14141 434 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 SSPNQ14714 243 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 TTBK2Q6IQ55 1244 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 MRPL41Q8IXM3 137 aaKnown RBP6.87□□□□□ -1.31
PROM1-203ENST00000502943 OXR1Q8N573 874 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 TMEM87BQ96K49 555 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 TRIT1Q9H3H1 467 aaKnown RBP6.87□□□□□ -1.31
PROM1-203ENST00000502943 WWC3Q9ULE0 1092 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 PCDHA11Q9Y5I1 949 aa6.87□□□□□ -1.31
PROM1-203ENST00000502943 FITM1A5D6W6 292 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 PGRP06401 933 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 LTKP29376 864 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 PDE6BP35913 854 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 GALK1P51570 392 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 ZNF385BQ569K4 471 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 ZNF552Q9H707 407 aaPredicted RBP6.86□□□□□ -1.31
PROM1-203ENST00000502943 CWC22Q9HCG8 908 aaKnown RBP6.86□□□□□ -1.31
PROM1-203ENST00000502943 GPATCH2Q9NW75 528 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 PCDHB5Q9Y5E4 795 aa6.86□□□□□ -1.31
PROM1-203ENST00000502943 NR0B2Q15466 257 aa6.85□□□□□ -1.31
PROM1-203ENST00000502943 SV2BQ7L1I2 683 aa6.85□□□□□ -1.31
PROM1-203ENST00000502943 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
PROM1-203ENST00000502943 GPR62Q9BZJ7 368 aa6.85□□□□□ -1.31
PROM1-203ENST00000502943 C12orf49Q9H741 205 aa6.85□□□□□ -1.31
PROM1-203ENST00000502943 RTEL1Q9NZ71 1219 aa6.85□□□□□ -1.31
PROM1-203ENST00000502943 EBF1Q9UH73 591 aa6.85□□□□□ -1.31
PROM1-203ENST00000502943 GPR160Q9UJ42 338 aa6.85□□□□□ -1.31
PROM1-203ENST00000502943 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
PROM1-203ENST00000502943 GIPC1O14908 333 aa6.84□□□□□ -1.31
PROM1-203ENST00000502943 DBX2Q6ZNG2 339 aa6.84□□□□□ -1.31
PROM1-203ENST00000502943 DTWD2Q8NBA8 298 aa6.84□□□□□ -1.31
PROM1-203ENST00000502943 RFXAPO00287 272 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 PI3P19957 117 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 SKOR2Q2VWA4 1001 aaPredicted RBP6.83□□□□□ -1.32
PROM1-203ENST00000502943 SLC6A19Q695T7 634 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 PPP1R13LQ8WUF5 828 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 SHISA4Q96DD7 197 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 XYLT2Q9H1B5 865 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 FAM8A1Q9UBU6 413 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 CEP131Q9UPN4 1083 aa6.83□□□□□ -1.32
PROM1-203ENST00000502943 PSPNO60542 156 aa6.82□□□□□ -1.32
PROM1-203ENST00000502943 LRRN2O75325 713 aa6.82□□□□□ -1.32
PROM1-203ENST00000502943 FMR1Q06787 632 aaKnown RBP eCLIP6.82□□□□□ -1.32
PROM1-203ENST00000502943 ALG1LQ6GMV1 187 aa6.82□□□□□ -1.32
PROM1-203ENST00000502943 DHX38Q92620 1227 aaKnown RBP6.82□□□□□ -1.32
PROM1-203ENST00000502943 ACSF2Q96CM8 615 aaPredicted RBP6.82□□□□□ -1.32
PROM1-203ENST00000502943 SPG7Q9UQ90 795 aa6.82□□□□□ -1.32
PROM1-203ENST00000502943 TACC3Q9Y6A5 838 aa6.82□□□□□ -1.32
PROM1-203ENST00000502943 OTOL1A6NHN0 477 aaPredicted RBP6.81□□□□□ -1.32
PROM1-203ENST00000502943 PRRT2Q7Z6L0 340 aaPredicted RBP6.81□□□□□ -1.32
PROM1-203ENST00000502943 GGNQ86UU5 652 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms