RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 JAG1P78504 1218 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 GRB14Q14449 540 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 TJAP1Q5JTD0 557 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 NAA16Q6N069 864 aaPredicted RBP22.15■■□□□ 1.14
HERC6-204ENST00000502870 PI16Q6UXB8 463 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 SLC39A5Q6ZMH5 540 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 MAPKAPK5Q8IW41 473 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 TGFBRAP1Q8WUH2 860 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 DNAJC18Q9H819 358 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 SMC4Q9NTJ3 1288 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 NDUFB9Q9Y6M9 179 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 ZNF521Q96K83 1311 aa22.14■■□□□ 1.14
HERC6-204ENST00000502870 UQCRFS1P1P0C7P4 283 aa22.14■■□□□ 1.13
HERC6-204ENST00000502870 CYBAP13498 195 aa22.14■■□□□ 1.13
HERC6-204ENST00000502870 COL9A1P20849 921 aa22.14■■□□□ 1.13
HERC6-204ENST00000502870 CYP2C19P33261 490 aa22.14■■□□□ 1.13
HERC6-204ENST00000502870 GJC2Q5T442 439 aaPredicted RBP22.14■■□□□ 1.13
HERC6-204ENST00000502870 NCOR1O75376 2440 aa22.14■■□□□ 1.13
HERC6-204ENST00000502870 ZNF236Q9UL36 1845 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 E9PSI1 815 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 TNFRSF10AO00220 468 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 ANP32CO43423 234 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 CNMDO75829 334 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 PPP4CP60510 307 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 SNX17Q15036 470 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 POTEEQ6S8J3 1075 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 LBX2Q6XYB7 198 aa22.13■■□□□ 1.13
HERC6-204ENST00000502870 SRGAP3O43295 1099 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 TRIM60Q495X7 471 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 CATSPERGQ6ZRH7 1159 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 DPP9Q86TI2 863 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 PDLIM7Q9NR12 457 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 PALD1Q9ULE6 856 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 CDH23Q9H251 3354 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 MYH1P12882 1939 aa22.12■■□□□ 1.13
HERC6-204ENST00000502870 IGSF3O75054 1194 aa22.11■■□□□ 1.13
HERC6-204ENST00000502870 GH2P01242 217 aa22.11■■□□□ 1.13
HERC6-204ENST00000502870 ZYXQ15942 572 aaKnown RBP22.11■■□□□ 1.13
HERC6-204ENST00000502870 C1orf53Q5VUE5 145 aa22.11■■□□□ 1.13
HERC6-204ENST00000502870 OLFML2BQ68BL8 750 aa22.11■■□□□ 1.13
HERC6-204ENST00000502870 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
HERC6-204ENST00000502870 NPLOC4Q8TAT6 608 aa22.11■■□□□ 1.13
HERC6-204ENST00000502870 RNPC3Q96LT9 517 aaKnown RBP22.11■■□□□ 1.13
HERC6-204ENST00000502870 API5Q9BZZ5 524 aaKnown RBP22.11■■□□□ 1.13
HERC6-204ENST00000502870 SLC5A4Q9NY91 659 aa22.11■■□□□ 1.13
HERC6-204ENST00000502870 SEPT4O43236 478 aa22.1■■□□□ 1.13
HERC6-204ENST00000502870 STRNO43815 780 aa22.1■■□□□ 1.13
HERC6-204ENST00000502870 MYCNP04198 464 aaPredicted RBP22.1■■□□□ 1.13
HERC6-204ENST00000502870 MCAMP43121 646 aa22.1■■□□□ 1.13
HERC6-204ENST00000502870 SHROOM1Q2M3G4 852 aaPredicted RBP22.1■■□□□ 1.13
HERC6-204ENST00000502870 TRPV1Q8NER1 839 aa22.1■■□□□ 1.13
HERC6-204ENST00000502870 VCAM1P19320 739 aa22.09■■□□□ 1.13
HERC6-204ENST00000502870 KIAA1683Q9H0B3 1180 aa22.09■■□□□ 1.13
HERC6-204ENST00000502870 TACC3Q9Y6A5 838 aa22.09■■□□□ 1.13
HERC6-204ENST00000502870 GNAI3P08754 354 aa22.08■■□□□ 1.13
HERC6-204ENST00000502870 MTX1Q13505 466 aa22.08■■□□□ 1.13
HERC6-204ENST00000502870 SAP30BPQ9UHR5 308 aaKnown RBP22.08■■□□□ 1.13
HERC6-204ENST00000502870 IGHA2P01877 340 aa22.07■■□□□ 1.12
HERC6-204ENST00000502870 ADCYAP1R1P41586 468 aa22.07■■□□□ 1.12
HERC6-204ENST00000502870 RAB3GAP1Q15042 981 aa22.07■■□□□ 1.12
HERC6-204ENST00000502870 CERS3Q8IU89 383 aa22.07■■□□□ 1.12
HERC6-204ENST00000502870 MEIS3Q99687 375 aa22.07■■□□□ 1.12
HERC6-204ENST00000502870 BTBD7Q9P203 1132 aa22.07■■□□□ 1.12
HERC6-204ENST00000502870 BDP1A6H8Y1 2624 aa22.07■■□□□ 1.12
HERC6-204ENST00000502870 TRIM43BA6NCK2 446 aa22.06■■□□□ 1.12
HERC6-204ENST00000502870 SPDYE16A6NNV3 312 aaPredicted RBP22.06■■□□□ 1.12
HERC6-204ENST00000502870 ADORA2AP29274 412 aa22.06■■□□□ 1.12
HERC6-204ENST00000502870 TATDN1Q6P1N9 297 aa22.06■■□□□ 1.12
HERC6-204ENST00000502870 TRIM43Q96BQ3 446 aaPredicted RBP22.06■■□□□ 1.12
HERC6-204ENST00000502870 CABP5Q9NP86 173 aa22.06■■□□□ 1.12
HERC6-204ENST00000502870 CLTBP09497 229 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 TLE2Q04725 743 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 TTC39AQ5SRH9 613 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 SH3RF1Q7Z6J0 888 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 SHCBP1Q8NEM2 672 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 FERMT2Q96AC1 680 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 RPAP3Q9H6T3 665 aaPredicted RBP22.05■■□□□ 1.12
HERC6-204ENST00000502870 SERPINB13Q9UIV8 391 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 MUC3AQ02505 3323 aa22.05■■□□□ 1.12
HERC6-204ENST00000502870 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.04■■□□□ 1.12
HERC6-204ENST00000502870 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.04■■□□□ 1.12
HERC6-204ENST00000502870 RAG1P15918 1043 aa22.04■■□□□ 1.12
HERC6-204ENST00000502870 G3BP1Q13283 466 aaKnown RBP eCLIP22.04■■□□□ 1.12
HERC6-204ENST00000502870 LRRC41Q15345 812 aa22.04■■□□□ 1.12
HERC6-204ENST00000502870 ABCB5Q2M3G0 1257 aa22.04■■□□□ 1.12
HERC6-204ENST00000502870 CCDC158Q5M9N0 1113 aa22.04■■□□□ 1.12
HERC6-204ENST00000502870 ANO1Q5XXA6 986 aa22.04■■□□□ 1.12
HERC6-204ENST00000502870 EHD4Q9H223 541 aa22.04■■□□□ 1.12
HERC6-204ENST00000502870 HOXC10Q9NYD6 342 aa22.04■■□□□ 1.12
HERC6-204ENST00000502870 NOB1Q9ULX3 412 aaKnown RBP22.04■■□□□ 1.12
HERC6-204ENST00000502870 MYO5AQ9Y4I1 1855 aaKnown RBP22.04■■□□□ 1.12
HERC6-204ENST00000502870 DNAJB2P25686 324 aa22.03■■□□□ 1.12
HERC6-204ENST00000502870 FPGSQ05932 587 aa22.03■■□□□ 1.12
HERC6-204ENST00000502870 GRIN2CQ14957 1233 aa22.03■■□□□ 1.12
HERC6-204ENST00000502870 CERKLQ49MI3 558 aaPredicted RBP22.03■■□□□ 1.12
HERC6-204ENST00000502870 ADGRA1Q86SQ6 560 aa22.03■■□□□ 1.12
HERC6-204ENST00000502870 MOV10L1Q9BXT6 1211 aaKnown RBP22.03■■□□□ 1.12
HERC6-204ENST00000502870 SNRKQ9NRH2 765 aa22.03■■□□□ 1.12
HERC6-204ENST00000502870 PHF24Q9UPV7 400 aa22.03■■□□□ 1.12
HERC6-204ENST00000502870 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms