RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZNF444Q8N0Y2 327 aaPredicted RBP29.82■■■□□ 2.36
LSM6-202ENST00000502781 PROCA1Q8NCQ7 364 aaPredicted RBP29.82■■■□□ 2.36
LSM6-202ENST00000502781 C19orf81C9J6K1 198 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 ZNF213O14771 459 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 FOXN1O15353 648 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 TRPA1O75762 1119 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 MTMR2Q13614 643 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 CASC1Q6TDU7 716 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 TBC1D10CQ8IV04 446 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 LSG1Q9H089 658 aaKnown RBP29.81■■■□□ 2.36
LSM6-202ENST00000502781 INCENPQ9NQS7 918 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 GREB1LQ9C091 1923 aaPredicted RBP29.81■■■□□ 2.36
LSM6-202ENST00000502781 PLIN4Q96Q06 1357 aa29.81■■■□□ 2.36
LSM6-202ENST00000502781 IGKV6D-41A0A0C4DH26 115 aa29.8■■■□□ 2.36
LSM6-202ENST00000502781 PCP11498 1178 aaKnown RBP29.8■■■□□ 2.36
LSM6-202ENST00000502781 HMGCS2P54868 508 aa29.8■■■□□ 2.36
LSM6-202ENST00000502781 AKNAD1Q5T1N1 836 aa29.8■■■□□ 2.36
LSM6-202ENST00000502781 ACER1Q8TDN7 264 aa29.8■■■□□ 2.36
LSM6-202ENST00000502781 STAG1Q8WVM7 1258 aa29.8■■■□□ 2.36
LSM6-202ENST00000502781 KIAA1683Q9H0B3 1180 aa29.8■■■□□ 2.36
LSM6-202ENST00000502781 KANSL2Q9H9L4 492 aa29.8■■■□□ 2.36
LSM6-202ENST00000502781 IMMTQ16891 758 aaKnown RBP29.79■■■□□ 2.36
LSM6-202ENST00000502781 NEDD1Q8NHV4 660 aa29.79■■■□□ 2.36
LSM6-202ENST00000502781 U3KPZ7 1027 aaPredicted RBP29.79■■■□□ 2.36
LSM6-202ENST00000502781 A0A1W2PRG0 241 aa29.78■■■□□ 2.36
LSM6-202ENST00000502781 ICA1Q05084 483 aa29.78■■■□□ 2.36
LSM6-202ENST00000502781 KIAA1211Q6ZU35 1233 aa29.78■■■□□ 2.36
LSM6-202ENST00000502781 CLEC10AQ8IUN9 316 aa29.78■■■□□ 2.36
LSM6-202ENST00000502781 C12orf42Q96LP6 360 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 RNF41Q9H4P4 317 aaPredicted RBP29.77■■■□□ 2.36
LSM6-202ENST00000502781 EMILIN3Q9NT22 766 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 AGTPBP1Q9UPW5 1226 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 SLC45A1Q9Y2W3 748 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 USP14P54578 494 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 DGKZQ13574 1117 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 FAM47AQ5JRC9 791 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 GADL1Q6ZQY3 521 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 MFSD6Q6ZSS7 791 aa29.77■■■□□ 2.36
LSM6-202ENST00000502781 LAMA4Q16363 1823 aa29.76■■■□□ 2.35
LSM6-202ENST00000502781 HSPA8P11142 646 aaKnown RBP29.76■■■□□ 2.35
LSM6-202ENST00000502781 TFAP4Q01664 338 aa29.76■■■□□ 2.35
LSM6-202ENST00000502781 USP17L2Q6R6M4 530 aa29.76■■■□□ 2.35
LSM6-202ENST00000502781 NYAP2Q9P242 653 aa29.76■■■□□ 2.35
LSM6-202ENST00000502781 TMX2Q9Y320 296 aa29.76■■■□□ 2.35
LSM6-202ENST00000502781 LOC285556D6RIA3 1793 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 PDHXO00330 501 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 CYP21A2P08686 494 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 TSPY3P0CV98 308 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 TSPY8P0CW00 308 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 EEF2P13639 858 aaKnown RBP29.75■■■□□ 2.35
LSM6-202ENST00000502781 CTCFP49711 727 aaPredicted RBP29.75■■■□□ 2.35
LSM6-202ENST00000502781 NT5C2P49902 561 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 TREML2Q5T2D2 321 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 R3HDMLQ9H3Y0 253 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 ANO2Q9NQ90 1003 aa29.75■■■□□ 2.35
LSM6-202ENST00000502781 RBM8AQ9Y5S9 174 aaKnown RBP29.75■■■□□ 2.35
LSM6-202ENST00000502781 NEDD4P46934 1319 aa29.74■■■□□ 2.35
LSM6-202ENST00000502781 CRHR2Q13324 411 aa29.74■■■□□ 2.35
LSM6-202ENST00000502781 NOM1Q5C9Z4 860 aaKnown RBP29.74■■■□□ 2.35
LSM6-202ENST00000502781 FEZ1Q99689 392 aa29.74■■■□□ 2.35
LSM6-202ENST00000502781 ARHGEF10LQ9HCE6 1279 aa29.74■■■□□ 2.35
LSM6-202ENST00000502781 MTMR4Q9NYA4 1195 aa29.74■■■□□ 2.35
LSM6-202ENST00000502781 TMOD4Q9NZQ9 345 aa29.74■■■□□ 2.35
LSM6-202ENST00000502781 TSKSQ9UJT2 592 aa29.74■■■□□ 2.35
LSM6-202ENST00000502781 RANBP6O60518 1105 aaKnown RBP29.73■■■□□ 2.35
LSM6-202ENST00000502781 TBC1D8O95759 1140 aa29.73■■■□□ 2.35
LSM6-202ENST00000502781 TAF1CQ15572 869 aaPredicted RBP29.73■■■□□ 2.35
LSM6-202ENST00000502781 NKX2-3Q8TAU0 364 aa29.73■■■□□ 2.35
LSM6-202ENST00000502781 CEP95Q96GE4 821 aa29.73■■■□□ 2.35
LSM6-202ENST00000502781 TSPY2A6NKD2 308 aa29.72■■■□□ 2.35
LSM6-202ENST00000502781 HOXA7P31268 230 aaPredicted RBP29.72■■■□□ 2.35
LSM6-202ENST00000502781 SH2D4AQ9H788 454 aa29.72■■■□□ 2.35
LSM6-202ENST00000502781 NOVP48745 357 aa29.71■■■□□ 2.35
LSM6-202ENST00000502781 MKL1Q969V6 931 aa29.71■■■□□ 2.35
LSM6-202ENST00000502781 ZFYVE28Q9HCC9 887 aa29.71■■■□□ 2.35
LSM6-202ENST00000502781 IL17RBQ9NRM6 502 aa29.71■■■□□ 2.35
LSM6-202ENST00000502781 TOMM22Q9NS69 142 aa29.71■■■□□ 2.35
LSM6-202ENST00000502781 NECTIN1Q15223 517 aa29.7■■■□□ 2.35
LSM6-202ENST00000502781 ZYXQ15942 572 aaKnown RBP29.7■■■□□ 2.35
LSM6-202ENST00000502781 RRP12Q5JTH9 1297 aaKnown RBP29.7■■■□□ 2.35
LSM6-202ENST00000502781 VCPKMTQ9H867 229 aa29.7■■■□□ 2.35
LSM6-202ENST00000502781 TCP11L1Q9NUJ3 509 aa29.7■■■□□ 2.35
LSM6-202ENST00000502781 SYNPO2Q9UMS6 1093 aa29.7■■■□□ 2.35
LSM6-202ENST00000502781 ADGRA2Q96PE1 1338 aa29.7■■■□□ 2.34
LSM6-202ENST00000502781 TLR2O60603 784 aa29.69■■■□□ 2.34
LSM6-202ENST00000502781 PABPC4Q13310 644 aaKnown RBP eCLIP29.69■■■□□ 2.341e-8■■■■■ 73.4
LSM6-202ENST00000502781 KIAA1755Q5JYT7 1200 aa29.69■■■□□ 2.34
LSM6-202ENST00000502781 ESR2Q92731 530 aa29.69■■■□□ 2.34
LSM6-202ENST00000502781 PARK7Q99497 189 aaKnown RBP29.69■■■□□ 2.34
LSM6-202ENST00000502781 TAF6LQ9Y6J9 622 aa29.69■■■□□ 2.34
LSM6-202ENST00000502781 TTLL1O95922 423 aa29.68■■■□□ 2.34
LSM6-202ENST00000502781 VCAM1P19320 739 aa29.68■■■□□ 2.34
LSM6-202ENST00000502781 LBX1P52954 281 aa29.68■■■□□ 2.34
LSM6-202ENST00000502781 PPP4R3BQ5MIZ7 849 aa29.68■■■□□ 2.34
LSM6-202ENST00000502781 LPAR1Q92633 364 aa29.68■■■□□ 2.34
LSM6-202ENST00000502781 CNNM2Q9H8M5 875 aa29.68■■■□□ 2.34
LSM6-202ENST00000502781 NMT2O60551 498 aa29.67■■■□□ 2.34
LSM6-202ENST00000502781 CYP2C8P10632 490 aa29.67■■■□□ 2.34
LSM6-202ENST00000502781 ATP2B2Q01814 1243 aa29.67■■■□□ 2.34
LSM6-202ENST00000502781 CLIP2Q9UDT6 1046 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms