RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CHPF2Q9P2E5 772 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 PPP2R3BQ9Y5P8 575 aa7.16□□□□□ -1.26
SPTA1-209ENST00000498708 TTLL8A6PVC2 850 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 ADCY3O60266 1144 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 INHAP05111 366 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 VGLL4Q14135 290 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 RASA3Q14644 834 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 NBPF20Q3BBV1 942 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 Q6ZVU0 165 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 ALYREFQ86V81 257 aaKnown RBP7.15□□□□□ -1.26
SPTA1-209ENST00000498708 TXNRD3Q86VQ6 643 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 PRMT6Q96LA8 375 aaPredicted RBP7.15□□□□□ -1.26
SPTA1-209ENST00000498708 TTYH1Q9H313 450 aaPredicted RBP7.15□□□□□ -1.26
SPTA1-209ENST00000498708 VEZTQ9HBM0 779 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 ZNF804BA4D1E1 1349 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 MYO3BQ8WXR4 1341 aa7.15□□□□□ -1.26
SPTA1-209ENST00000498708 DOCK3Q8IZD9 2030 aa7.15□□□□□ -1.27
SPTA1-209ENST00000498708 CACNA1AO00555 2505 aa7.15□□□□□ -1.27
SPTA1-209ENST00000498708 XIRP2A4UGR9 3374 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 ELL2O00472 640 aaPredicted RBP7.14□□□□□ -1.27
SPTA1-209ENST00000498708 IRS4O14654 1257 aaPredicted RBP7.14□□□□□ -1.27
SPTA1-209ENST00000498708 PPFIA3O75145 1194 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 WDHD1O75717 1129 aaPredicted RBP7.14□□□□□ -1.27
SPTA1-209ENST00000498708 ATP2B4P23634 1241 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 XDHP47989 1333 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 LMOD3Q0VAK6 560 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 DDX10Q13206 875 aaKnown RBP7.14□□□□□ -1.27
SPTA1-209ENST00000498708 DLGAP5Q15398 846 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 DDX60LQ5H9U9 1706 aaKnown RBP7.14□□□□□ -1.27
SPTA1-209ENST00000498708 HDGFL1Q5TGJ6 251 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 TTLL5Q6EMB2 1281 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 JARID2Q92833 1246 aaPredicted RBP7.14□□□□□ -1.27
SPTA1-209ENST00000498708 ADGRA2Q96PE1 1338 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 CCDC85AQ96PX6 553 aaPredicted RBP7.14□□□□□ -1.27
SPTA1-209ENST00000498708 DNMT3LQ9UJW3 386 aa7.14□□□□□ -1.27
SPTA1-209ENST00000498708 FAM205AQ6ZU69 1335 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 SPINT1O43278 529 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 CETPP11597 493 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 FOSL2P15408 326 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 FLT3LGP49771 235 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 MMP14P50281 582 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 GTF2IP78347 998 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 CERS5Q8N5B7 392 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 MTMR14Q8NCE2 650 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 ADAM32Q8TC27 787 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 ISCA1Q9BUE6 129 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 C11orf49Q9H6J7 331 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 GOPCQ9HD26 462 aa7.13□□□□□ -1.27
SPTA1-209ENST00000498708 ZCCHC17Q9NP64 241 aaKnown RBP7.13□□□□□ -1.27
SPTA1-209ENST00000498708 MED23Q9ULK4 1368 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 TCF20Q9UGU0 1960 aaKnown RBP7.12□□□□□ -1.27
SPTA1-209ENST00000498708 F8W031 263 aaPredicted RBP7.12□□□□□ -1.27
SPTA1-209ENST00000498708 CHL1O00533 1208 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 CAPN2P17655 700 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
SPTA1-209ENST00000498708 KLRK1P26718 216 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 WDR43Q15061 677 aaKnown RBP eCLIP7.12□□□□□ -1.27
SPTA1-209ENST00000498708 CFAP100Q494V2 611 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 PLBD2Q8NHP8 589 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.12□□□□□ -1.27
SPTA1-209ENST00000498708 ADAMTS19Q8TE59 1207 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 TEPSINQ96N21 525 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 MYD88Q99836 296 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 COA1Q9GZY4 146 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.12□□□□□ -1.27
SPTA1-209ENST00000498708 PHAXQ9H814 394 aaKnown RBP7.12□□□□□ -1.27
SPTA1-209ENST00000498708 BABAM1Q9NWV8 329 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 SNCAIPQ9Y6H5 919 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 SPEF2Q9C093 1822 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 REV3LO60673 3130 aa7.12□□□□□ -1.27
SPTA1-209ENST00000498708 MUC6Q6W4X9 2439 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 PFASO15067 1338 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 PDHXO00330 501 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 BCRP11274 1271 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 FCGRTP55899 365 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 CBLBQ13191 982 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 SNAPC2Q13487 334 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 RALBP1Q15311 655 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 INTS6LQ5JSJ4 861 aaKnown RBP7.11□□□□□ -1.27
SPTA1-209ENST00000498708 DUSP27Q5VZP5 1158 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 ZKSCAN4Q969J2 545 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-209ENST00000498708 RUNDC1Q96C34 613 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 UHRF1Q96T88 793 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-209ENST00000498708 DBF4Q9UBU7 674 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-209ENST00000498708 MINPP1Q9UNW1 487 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 ADAMTS8Q9UP79 889 aa7.11□□□□□ -1.27
SPTA1-209ENST00000498708 MYBBP1AQ9BQG0 1328 aaKnown RBP7.1□□□□□ -1.27
SPTA1-209ENST00000498708 MYO1BO43795 1136 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 CYP2C8P10632 490 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 RFC5P40937 340 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 CCT4P50991 539 aaKnown RBP7.1□□□□□ -1.27
SPTA1-209ENST00000498708 PTSQ03393 145 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 MOGSQ13724 837 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 LRRC26Q2I0M4 334 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 TMEM259Q4ZIN3 620 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 ANKRD23Q86SG2 305 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 ERO1BQ86YB8 467 aa7.1□□□□□ -1.27
SPTA1-209ENST00000498708 PCMTD1Q96MG8 357 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-209ENST00000498708 NECAB3Q96P71 396 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-209ENST00000498708 ASB2Q96Q27 587 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms