RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 PARP10Q53GL7 1025 aa6.77□□□□□ -1.33
NF1-217ENST00000498569 DDX46Q7L014 1031 aaKnown RBP6.77□□□□□ -1.33
NF1-217ENST00000498569 UTP14AQ9BVJ6 771 aaKnown RBP6.77□□□□□ -1.33
NF1-217ENST00000498569 RTFDC1Q9BY42 306 aaPredicted RBP6.77□□□□□ -1.33
NF1-217ENST00000498569 ECM29Q5VYK3 1845 aa6.77□□□□□ -1.33
NF1-217ENST00000498569 LAMB1P07942 1786 aa6.77□□□□□ -1.33
NF1-217ENST00000498569 HTATSF1O43719 755 aaKnown RBP6.76□□□□□ -1.33
NF1-217ENST00000498569 BBOX1O75936 387 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 PKN2Q16513 984 aaKnown RBP6.76□□□□□ -1.33
NF1-217ENST00000498569 FOXD4L6Q3SYB3 417 aaPredicted RBP6.76□□□□□ -1.33
NF1-217ENST00000498569 DLK2Q6UY11 383 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 FOXD4L3Q6VB84 417 aaPredicted RBP6.76□□□□□ -1.33
NF1-217ENST00000498569 SP8Q8IXZ3 490 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 ZNF34Q8IZ26 560 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 PHTF2Q8N3S3 785 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 PNISRQ8TF01 805 aaKnown RBP6.76□□□□□ -1.33
NF1-217ENST00000498569 DPF2Q92785 391 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 PRM3Q9NNZ6 103 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 MIS18AQ9NYP9 233 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 TRIOBPQ9H2D6 2365 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 CUL9Q8IWT3 2517 aa6.76□□□□□ -1.33
NF1-217ENST00000498569 A0A0C4DFX4 3053 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 YDJCA8MPS7 323 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 PSMD14O00487 310 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 EFSO43281 561 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 RPS12P25398 132 aaKnown RBP6.75□□□□□ -1.33
NF1-217ENST00000498569 WASHC4Q2M389 1173 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 KIF4BQ2VIQ3 1234 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 TMC4Q7Z404 712 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 CSRNP1Q96S65 589 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 PCGF6Q9BYE7 350 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 DBNDD1Q9H9R9 158 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 PRDM6Q9NQX0 595 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 GGA3Q9NZ52 723 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 HCN2Q9UL51 889 aa6.75□□□□□ -1.33
NF1-217ENST00000498569 RANBP2P49792 3224 aaKnown RBP6.74□□□□□ -1.33
NF1-217ENST00000498569 ZNF646O15015 1829 aaPredicted RBP6.74□□□□□ -1.33
NF1-217ENST00000498569 ADARB2-AS1A8MUL3 147 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 CDK2AP1O14519 115 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 SIN3BO75182 1162 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 HCLS1P14317 486 aaPredicted RBP6.74□□□□□ -1.33
NF1-217ENST00000498569 TRIM26Q12899 539 aaPredicted RBP6.74□□□□□ -1.33
NF1-217ENST00000498569 TRIM28Q13263 835 aaKnown RBP6.74□□□□□ -1.33
NF1-217ENST00000498569 GRAPQ13588 217 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 MAP7D1Q3KQU3 841 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 HSP90AB3PQ58FF7 597 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 SYT9Q86SS6 491 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 RASAL3Q86YV0 1011 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 GRAPLQ8TC17 118 aaPredicted RBP6.74□□□□□ -1.33
NF1-217ENST00000498569 CDCA5Q96FF9 252 aa6.74□□□□□ -1.33
NF1-217ENST00000498569 M0R082 166 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 ECE2O60344 883 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 EGFRP00533 1210 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 MTFR1Q15390 333 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 PRSS36Q5K4E3 855 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 SLC10A5Q5PT55 438 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 FBXO46Q6PJ61 603 aaPredicted RBP6.73□□□□□ -1.33
NF1-217ENST00000498569 ZNF295-AS1Q8N0V1 137 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 ZNF417Q8TAU3 575 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 ZNF296Q8WUU4 475 aaPredicted RBP6.73□□□□□ -1.33
NF1-217ENST00000498569 ZNF587Q96SQ5 575 aaPredicted RBP6.73□□□□□ -1.33
NF1-217ENST00000498569 EYA3Q99504 573 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 TRMT112Q9UI30 125 aaKnown RBP6.73□□□□□ -1.33
NF1-217ENST00000498569 SH3TC1Q8TE82 1336 aa6.73□□□□□ -1.33
NF1-217ENST00000498569 COL6A3P12111 3177 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 COL4A1P02462 1669 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 A6NJY4 79 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 TBC1D8O95759 1140 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 EIF2S2P20042 333 aaKnown RBP6.72□□□□□ -1.33
NF1-217ENST00000498569 EIF4A1P60842 406 aaKnown RBP6.72□□□□□ -1.33
NF1-217ENST00000498569 FKBP1BP68106 108 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 SREBF2Q12772 1141 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 LRP8Q14114 963 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 TSGA10IPQ3SY00 556 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 HABP4Q5JVS0 413 aaKnown RBP6.72□□□□□ -1.33
NF1-217ENST00000498569 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
NF1-217ENST00000498569 MDFIQ99750 246 aa6.72□□□□□ -1.33
NF1-217ENST00000498569 THUMPD2Q9BTF0 503 aaKnown RBP6.72□□□□□ -1.33
NF1-217ENST00000498569 IQSEC3Q9UPP2 1182 aaPredicted RBP6.72□□□□□ -1.33
NF1-217ENST00000498569 GPC6Q9Y625 555 aaPredicted RBP6.72□□□□□ -1.33
NF1-217ENST00000498569 OTOFQ9HC10 1997 aa6.71□□□□□ -1.33
NF1-217ENST00000498569 RTL9Q8NET4 1388 aa6.71□□□□□ -1.33
NF1-217ENST00000498569 C9orf172C9J069 976 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 AIMP1Q12904 312 aaKnown RBP6.71□□□□□ -1.34
NF1-217ENST00000498569 NLRP10Q86W26 655 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 TNFRSF25Q93038 417 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 ZC3H12CQ9C0D7 883 aaKnown RBP6.71□□□□□ -1.34
NF1-217ENST00000498569 SNRKQ9NRH2 765 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 SERTAD1Q9UHV2 236 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 TSPYL4Q9UJ04 414 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 ASTN2O75129 1339 aaPredicted RBP6.71□□□□□ -1.34
NF1-217ENST00000498569 MAPK8IP3Q9UPT6 1336 aa6.71□□□□□ -1.34
NF1-217ENST00000498569 ZNF609O15014 1411 aa6.7□□□□□ -1.34
NF1-217ENST00000498569 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
NF1-217ENST00000498569 FKTNO75072 461 aa6.7□□□□□ -1.34
NF1-217ENST00000498569 UFL1O94874 794 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms