RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 CTNND1O60716 968 aaKnown RBP7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 CIAO1O76071 339 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 SYN1P17600 705 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 JAG1P78504 1218 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 RASGRF1Q13972 1273 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 MRPL50Q8N5N7 158 aaKnown RBP7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 ANKRD13CQ8N6S4 541 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 TXNRD2Q9NNW7 524 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 C9orf78Q9NZ63 289 aaPredicted RBP7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 PCDHGA10Q9Y5H3 936 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 PTPRSQ13332 1948 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 MROH7-TTC4A0A0A0MT08 1334 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 XIRP2A4UGR9 3374 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 GPR75-ASB3A0A0A6YYF3 556 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 IFIT1P09914 478 aaKnown RBP7□□□□□ -1.29
CSNK1E-214ENST00000498529 XRCC5P13010 732 aaKnown RBP7□□□□□ -1.29
CSNK1E-214ENST00000498529 ADORA1P30542 326 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 FOSBP53539 338 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 LRRC26Q2I0M4 334 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 TYW1BQ6NUM6 668 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 GADL1Q6ZQY3 521 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 METTL16Q86W50 562 aaKnown RBP7□□□□□ -1.29
CSNK1E-214ENST00000498529 PHF6Q8IWS0 365 aaKnown RBP eCLIP7□□□□□ -1.29
CSNK1E-214ENST00000498529 NBPF3Q9H094 633 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 ASCC2Q9H1I8 757 aaPredicted RBP7□□□□□ -1.29
CSNK1E-214ENST00000498529 C11orf49Q9H6J7 331 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 USP40Q9NVE5 1235 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 PTPRCP08575 1304 aa7□□□□□ -1.29
CSNK1E-214ENST00000498529 BRWD1Q9NSI6 2320 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 TRIM75PA6NK02 468 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 FAM196BA6NMK8 535 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 PEX10O60683 326 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 TFRCP02786 760 aaKnown RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 LDHBP07195 334 aaKnown RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 SLC5A1P13866 664 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 HOXB3P14651 431 aaPredicted RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 FECHP22830 423 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 HOXA7P31268 230 aaPredicted RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 GCLCP48506 637 aaPredicted RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 SHROOM1Q2M3G4 852 aaPredicted RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 VARS2Q5ST30 1063 aaKnown RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 MORN1Q5T089 497 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 VPS37DQ86XT2 251 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 TMUB1Q9BVT8 246 aa6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 OSBPL5Q9H0X9 879 aaPredicted RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 BIN2Q9UBW5 565 aaPredicted RBP6.99□□□□□ -1.29
CSNK1E-214ENST00000498529 CNMDO75829 334 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 CCND3P30281 292 aaPredicted RBP6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 CAP2P40123 477 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 BTDP43251 543 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 HMGCS2P54868 508 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 CACNB2Q08289 660 aaPredicted RBP6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 SNX17Q15036 470 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 ATP2B3Q16720 1220 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 CCDC102BQ68D86 513 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 SLC4A10Q6U841 1118 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 PARP9Q8IXQ6 854 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 TTC13Q8NBP0 860 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 ZNF280CQ8ND82 737 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 SMCR8Q8TEV9 937 aaPredicted RBP6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 COA7Q96BR5 231 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 WDR18Q9BV38 432 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 TBC1D2Q9BYX2 928 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 FAM117AQ9C073 453 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 PORCNQ9H237 461 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 HMX1Q9NP08 348 aaPredicted RBP6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 PICK1Q9NRD5 415 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 PNMA3Q9UL41 463 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 DENND2AQ9ULE3 1009 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 TANC1Q9C0D5 1861 aa6.98□□□□□ -1.29
CSNK1E-214ENST00000498529 MYH4Q9Y623 1939 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 ROBO3Q96MS0 1386 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 COL4A4P53420 1690 aaPredicted RBP6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 FRAT2O75474 233 aaPredicted RBP6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 MECOMQ03112 1051 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 SPP2Q13103 211 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 CCL14Q16627 93 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 SOCS4Q8WXH5 440 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 NSUN4Q96CB9 384 aaKnown RBP6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 APBA2Q99767 749 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 UBE2OQ9C0C9 1292 aaKnown RBP6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 TTYH1Q9H313 450 aaPredicted RBP6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 GOPCQ9HD26 462 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 COPRSQ9NQ92 184 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 FLRT1Q9NZU1 646 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 RBPJLQ9UBG7 517 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 ATG2AQ2TAZ0 1938 aa6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 TCF20Q9UGU0 1960 aaKnown RBP6.97□□□□□ -1.29
CSNK1E-214ENST00000498529 MAP4K4O95819 1239 aaPredicted RBP6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 HOXC6P09630 235 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 ARID4AP29374 1257 aaPredicted RBP6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 HERVK_113P62684 666 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 MTX1Q13505 466 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 Q3C1V9 767 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 PI16Q6UXB8 463 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 LBX2Q6XYB7 198 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 TRPV1Q8NER1 839 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 SSH1Q8WYL5 1049 aa6.96□□□□□ -1.3
CSNK1E-214ENST00000498529 DDRGK1Q96HY6 314 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms