RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 RIOK1Q9BRS2 568 aaKnown RBP21.35■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L15C9J2P7 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L13C9JLJ4 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L11C9JVI0 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L18D6R9N7 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L22D6RA61 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L17D6RBQ6 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L19D6RCP7 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L20D6RJB6 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 RGS2P41220 211 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP14P54578 494 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 USP17L24Q0WX57 530 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 ABCB5Q2M3G0 1257 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 MORN1Q5T089 497 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 KIAA1683Q9H0B3 1180 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 C11orf49Q9H6J7 331 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 IL1RAPL2Q9NP60 686 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 RABGAP1Q9Y3P9 1069 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 NAV1Q8NEY1 1877 aa21.34■■□□□ 1.01
SMIM19-206ENST00000498447 CNMDO75829 334 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 SHMT1P34896 483 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 PLCD1P51178 756 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 CACNB2Q08289 660 aaPredicted RBP21.33■■□□□ 1.01
SMIM19-206ENST00000498447 CCL14Q16627 93 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 HSP90AB4PQ58FF6 505 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 RHPN1Q8TCX5 695 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 ACER1Q8TDN7 264 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 APBA2Q99767 749 aa21.33■■□□□ 1.01
SMIM19-206ENST00000498447 CWC22Q9HCG8 908 aaKnown RBP21.33■■□□□ 1.01
SMIM19-206ENST00000498447 MAGEB6P1A0A0J9YX57 407 aa21.32■■□□□ 1
SMIM19-206ENST00000498447 VCAM1P19320 739 aa21.32■■□□□ 1
SMIM19-206ENST00000498447 TTF1Q15361 905 aaPredicted RBP21.32■■□□□ 1
SMIM19-206ENST00000498447 CATSPERGQ6ZRH7 1159 aa21.32■■□□□ 1
SMIM19-206ENST00000498447 MIER1Q8N108 512 aa21.32■■□□□ 1
SMIM19-206ENST00000498447 CABP5Q9NP86 173 aa21.32■■□□□ 1
SMIM19-206ENST00000498447 ZMYND8Q9ULU4 1186 aaPredicted RBP21.32■■□□□ 1
SMIM19-206ENST00000498447 PDE6AP16499 860 aa21.31■■□□□ 1
SMIM19-206ENST00000498447 CCNA1P78396 465 aa21.31■■□□□ 1
SMIM19-206ENST00000498447 GDF15Q99988 308 aa21.31■■□□□ 1
SMIM19-206ENST00000498447 PFASO15067 1338 aa21.3■■□□□ 1
SMIM19-206ENST00000498447 SOX1O00570 391 aaPredicted RBP21.3■■□□□ 1
SMIM19-206ENST00000498447 POLR3DP05423 398 aaPredicted RBP21.3■■□□□ 1
SMIM19-206ENST00000498447 CCND3P30281 292 aaPredicted RBP21.3■■□□□ 1
SMIM19-206ENST00000498447 GUCY1A2P33402 732 aa21.3■■□□□ 1
SMIM19-206ENST00000498447 GABPAQ06546 454 aa21.3■■□□□ 1
SMIM19-206ENST00000498447 MAP2K5Q13163 448 aa21.3■■□□□ 1
SMIM19-206ENST00000498447 SLC9C2Q5TAH2 1124 aa21.3■■□□□ 1
SMIM19-206ENST00000498447 LBX2Q6XYB7 198 aa21.3■■□□□ 1
SMIM19-206ENST00000498447 CRNKL1Q9BZJ0 848 aaKnown RBP21.3■■□□□ 1
SMIM19-206ENST00000498447 ZBED9Q6R2W3 1325 aa21.29■■□□□ 1
SMIM19-206ENST00000498447 GLRX3O76003 335 aaKnown RBP21.29■■□□□ 1
SMIM19-206ENST00000498447 BMP8BP34820 402 aa21.29■■□□□ 1
SMIM19-206ENST00000498447 WDR78Q5VTH9 848 aa21.29■■□□□ 1
SMIM19-206ENST00000498447 LHX8Q68G74 356 aa21.29■■□□□ 1
SMIM19-206ENST00000498447 RPAP3Q9H6T3 665 aaPredicted RBP21.29■■□□□ 1
SMIM19-206ENST00000498447 COL6A1P12109 1028 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 SYN1P17600 705 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 EVX2Q03828 476 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 SEPT2Q15019 361 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 CLASRPQ8N2M8 674 aaKnown RBP21.28■■□□□ 1
SMIM19-206ENST00000498447 EDC3Q96F86 508 aaKnown RBP21.28■■□□□ 1
SMIM19-206ENST00000498447 LRCH3Q96II8 777 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 MCM9Q9NXL9 1143 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 BTBD7Q9P203 1132 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 ZNF532Q9HCE3 1301 aa21.28■■□□□ 1
SMIM19-206ENST00000498447 SLC15A5A6NIM6 579 aa21.27■■□□□ 1
SMIM19-206ENST00000498447 SPDYE16A6NNV3 312 aaPredicted RBP21.27■■□□□ 1
SMIM19-206ENST00000498447 APBB1O00213 710 aa21.27■■□□□ 1
SMIM19-206ENST00000498447 GOLIM4O00461 696 aa21.27■■□□□ 1
SMIM19-206ENST00000498447 PTPREP23469 700 aa21.27■■□□□ 1
SMIM19-206ENST00000498447 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.27■■□□□ 1
SMIM19-206ENST00000498447 KIF1BPQ96EK5 621 aa21.27■■□□□ 1
SMIM19-206ENST00000498447 DNAJC2Q99543 621 aaKnown RBP21.27■■□□□ 1
SMIM19-206ENST00000498447 FRMPD3Q5JV73 1810 aa21.27■□□□□ 0.99
SMIM19-206ENST00000498447 TCRBV5S4A2TA0A5A2 114 aa21.26■□□□□ 0.99
SMIM19-206ENST00000498447 RPAP2Q8IXW5 612 aaPredicted RBP21.26■□□□□ 0.99
SMIM19-206ENST00000498447 LCORLQ8N3X6 602 aa21.26■□□□□ 0.99
SMIM19-206ENST00000498447 SDR42E1Q8WUS8 393 aa21.26■□□□□ 0.99
SMIM19-206ENST00000498447 FLRT1Q9NZU1 646 aa21.26■□□□□ 0.99
SMIM19-206ENST00000498447 A0A1W2PRG0 241 aa21.25■□□□□ 0.99
SMIM19-206ENST00000498447 MPHOSPH10O00566 681 aaKnown RBP21.25■□□□□ 0.99
SMIM19-206ENST00000498447 IFIT2P09913 472 aaKnown RBP21.25■□□□□ 0.99
SMIM19-206ENST00000498447 MS4A1P11836 297 aa21.25■□□□□ 0.99
SMIM19-206ENST00000498447 MAGEA10P43363 369 aaPredicted RBP21.25■□□□□ 0.99
SMIM19-206ENST00000498447 GRB14Q14449 540 aa21.25■□□□□ 0.99
SMIM19-206ENST00000498447 MFSD14CQ5VZR4 134 aa21.25■□□□□ 0.99
SMIM19-206ENST00000498447 DCP1AQ9NPI6 582 aaPredicted RBP21.25■□□□□ 0.99
SMIM19-206ENST00000498447 IVNS1ABPQ9Y6Y0 642 aa21.25■□□□□ 0.99
SMIM19-206ENST00000498447 HMMRO75330 724 aa21.24■□□□□ 0.99
SMIM19-206ENST00000498447 HOXC6P09630 235 aa21.24■□□□□ 0.99
SMIM19-206ENST00000498447 CYP2D6P10635 497 aa21.24■□□□□ 0.99
SMIM19-206ENST00000498447 SIRT2Q8IXJ6 389 aa21.24■□□□□ 0.99
SMIM19-206ENST00000498447 BCL11AQ9H165 835 aa21.24■□□□□ 0.99
SMIM19-206ENST00000498447 COL6A3P12111 3177 aa21.24■□□□□ 0.99
SMIM19-206ENST00000498447 LRRC26Q2I0M4 334 aa21.23■□□□□ 0.99
SMIM19-206ENST00000498447 SLC44A5Q8NCS7 719 aa21.23■□□□□ 0.99
SMIM19-206ENST00000498447 ARMT1Q9H993 441 aa21.23■□□□□ 0.99
SMIM19-206ENST00000498447 DDX19BQ9UMR2 479 aa21.23■□□□□ 0.99
SMIM19-206ENST00000498447 A0A0G2JMZ2 1700 aa21.22■□□□□ 0.99
SMIM19-206ENST00000498447 ATP2B2Q01814 1243 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms