RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SLC15A5A6NIM6 579 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L15C9J2P7 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L13C9JLJ4 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L11C9JVI0 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L18D6R9N7 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L22D6RA61 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L17D6RBQ6 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L19D6RCP7 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L20D6RJB6 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 GH2P01242 217 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 CYP2C19P33261 490 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 USP17L24Q0WX57 530 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 FOXP4Q8IVH2 680 aaPredicted RBP14.32□□□□□ -0.12
CDK9-205ENST00000498339 API5Q9BZZ5 524 aaKnown RBP14.32□□□□□ -0.12
CDK9-205ENST00000498339 SEMA6BQ9H3T3 888 aa14.32□□□□□ -0.12
CDK9-205ENST00000498339 ZNF236Q9UL36 1845 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 UQCRFS1P1P0C7P4 283 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 PTPREP23469 700 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 RAB3GAP1Q15042 981 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 TTC39AQ5SRH9 613 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 C9orf50Q5SZB4 431 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 SNRKQ9NRH2 765 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.31□□□□□ -0.12
CDK9-205ENST00000498339 MYH8P13535 1937 aa14.31□□□□□ -0.12
CDK9-205ENST00000498339 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
CDK9-205ENST00000498339 CNMDO75829 334 aa14.3□□□□□ -0.12
CDK9-205ENST00000498339 TRIM60Q495X7 471 aa14.3□□□□□ -0.12
CDK9-205ENST00000498339 ARRDC4Q8NCT1 418 aa14.3□□□□□ -0.12
CDK9-205ENST00000498339 SYMPKQ92797 1274 aaKnown RBP14.3□□□□□ -0.12
CDK9-205ENST00000498339 BADQ92934 168 aa14.3□□□□□ -0.12
CDK9-205ENST00000498339 GNAI3P08754 354 aa14.29□□□□□ -0.12
CDK9-205ENST00000498339 USP14P54578 494 aa14.29□□□□□ -0.12
CDK9-205ENST00000498339 SMAD3P84022 425 aaKnown RBP14.29□□□□□ -0.12
CDK9-205ENST00000498339 G3BP1Q13283 466 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK9-205ENST00000498339 GRB14Q14449 540 aa14.29□□□□□ -0.12
CDK9-205ENST00000498339 POTEEQ6S8J3 1075 aa14.29□□□□□ -0.12
CDK9-205ENST00000498339 SLC39A5Q6ZMH5 540 aa14.29□□□□□ -0.12
CDK9-205ENST00000498339 DPP9Q86TI2 863 aa14.29□□□□□ -0.12
CDK9-205ENST00000498339 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
CDK9-205ENST00000498339 CYBAP13498 195 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 VCAM1P19320 739 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 USP5P45974 858 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 SLFN5Q08AF3 891 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 CATSPERGQ6ZRH7 1159 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 ADGRA1Q86SQ6 560 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 METTL16Q86W50 562 aaKnown RBP14.28□□□□□ -0.12
CDK9-205ENST00000498339 TRPV1Q8NER1 839 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 C12orf42Q96LP6 360 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
CDK9-205ENST00000498339 TTYH1Q9H313 450 aaPredicted RBP14.28□□□□□ -0.12
CDK9-205ENST00000498339 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
CDK9-205ENST00000498339 ZNFX1Q9P2E3 1918 aaKnown RBP14.28□□□□□ -0.12
CDK9-205ENST00000498339 PLXNA1Q9UIW2 1896 aa14.27□□□□□ -0.12
CDK9-205ENST00000498339 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.12
CDK9-205ENST00000498339 MUC3AQ02505 3323 aa14.27□□□□□ -0.12
CDK9-205ENST00000498339 HOXC6P09630 235 aa14.27□□□□□ -0.13
CDK9-205ENST00000498339 PPP4CP60510 307 aa14.27□□□□□ -0.13
CDK9-205ENST00000498339 CCDC158Q5M9N0 1113 aa14.27□□□□□ -0.13
CDK9-205ENST00000498339 FERMT2Q96AC1 680 aa14.27□□□□□ -0.13
CDK9-205ENST00000498339 RPAP3Q9H6T3 665 aaPredicted RBP14.27□□□□□ -0.13
CDK9-205ENST00000498339 PDLIM7Q9NR12 457 aa14.27□□□□□ -0.13
CDK9-205ENST00000498339 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
CDK9-205ENST00000498339 ADORA2AP29274 412 aa14.26□□□□□ -0.13
CDK9-205ENST00000498339 DYNLL1P63167 89 aaKnown RBP14.26□□□□□ -0.13
CDK9-205ENST00000498339 OS9Q13438 667 aaPredicted RBP14.26□□□□□ -0.13
CDK9-205ENST00000498339 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
CDK9-205ENST00000498339 TANGO6Q9C0B7 1094 aa14.26□□□□□ -0.13
CDK9-205ENST00000498339 CABP5Q9NP86 173 aa14.26□□□□□ -0.13
CDK9-205ENST00000498339 SERPINB13Q9UIV8 391 aa14.26□□□□□ -0.13
CDK9-205ENST00000498339 COL11A1P12107 1806 aaPredicted RBP14.25□□□□□ -0.13
CDK9-205ENST00000498339 SEPT4O43236 478 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 CYP7A1P22680 504 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 ADCYAP1R1P41586 468 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 MTX1Q13505 466 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 CERKLQ49MI3 558 aaPredicted RBP14.25□□□□□ -0.13
CDK9-205ENST00000498339 SH3RF1Q7Z6J0 888 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 ACER1Q8TDN7 264 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 CDCA7LQ96GN5 454 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 KIAA1683Q9H0B3 1180 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 SMCHD1A6NHR9 2005 aa14.25□□□□□ -0.13
CDK9-205ENST00000498339 TRIM43BA6NCK2 446 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 IDH1O75874 414 aaKnown RBP14.24□□□□□ -0.13
CDK9-205ENST00000498339 GNAI2P04899 355 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 CYP2E1P05181 493 aaPredicted RBP14.24□□□□□ -0.13
CDK9-205ENST00000498339 COL9A1P20849 921 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 ZAP70P43403 619 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 PLS1Q14651 629 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 TJAP1Q5JTD0 557 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 OLFML2BQ68BL8 750 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 TATDN1Q6P1N9 297 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
CDK9-205ENST00000498339 LBX2Q6XYB7 198 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 TRIM43Q96BQ3 446 aaPredicted RBP14.24□□□□□ -0.13
CDK9-205ENST00000498339 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 SLC5A4Q9NY91 659 aa14.24□□□□□ -0.13
CDK9-205ENST00000498339 PARP14Q460N5 1801 aa14.23□□□□□ -0.13
CDK9-205ENST00000498339 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
CDK9-205ENST00000498339 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms