RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MYH4Q9Y623 1939 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 PRKAB2O43741 272 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 CHGBP05060 677 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 FLT3LGP49771 235 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 UBXN2AP68543 259 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 MTFR1Q15390 333 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 TSHZ3Q63HK5 1081 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 C12orf42Q96LP6 360 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 CRBNQ96SW2 442 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 BIN2Q9UBW5 565 aaPredicted RBP10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 SWAP70Q9UH65 585 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
HMGXB4-207ENST00000498212 COL11A1P12107 1806 aaPredicted RBP10.21□□□□□ -0.78
HMGXB4-207ENST00000498212 RLFQ13129 1914 aa10.21□□□□□ -0.78
HMGXB4-207ENST00000498212 GREB1LQ9C091 1923 aaPredicted RBP10.21□□□□□ -0.78
HMGXB4-207ENST00000498212 MPHOSPH10O00566 681 aaKnown RBP10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 ADCY3O60266 1144 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 CYP2D6P10635 497 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 GUCY1A2P33402 732 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 USP14P54578 494 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 HERVK_113P62684 666 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 IRF5Q13568 498 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 SEPT2Q15019 361 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 TTC41PQ6P2S7 1318 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 KBTBD3Q8NAB2 608 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 PXYLP1Q8TE99 480 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 GTF3C2Q8WUA4 911 aaPredicted RBP10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 P2RX7Q99572 595 aaKnown RBP10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 KIAA1683Q9H0B3 1180 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 PUS7LQ9H0K6 701 aaKnown RBP10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 MORF4L1Q9UBU8 362 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 SLC4A4Q9Y6R1 1079 aa10.2□□□□□ -0.78
HMGXB4-207ENST00000498212 PDE4DIPQ5VU43 2346 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 A0A0G2JMZ2 1700 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L12C9JPN9 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L21D6R901 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 ERC2O15083 957 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 ZFYP08048 801 aaPredicted RBP10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 CCL5P13501 91 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 PRPF38BQ5VTL8 546 aaKnown RBP10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 TMEM179Q6ZVK1 233 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 SLC44A5Q8NCS7 719 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 GPRC5AQ8NFJ5 357 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 NKX2-3Q8TAU0 364 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 ACER1Q8TDN7 264 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 APPBP2Q92624 585 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 DYNLL2Q96FJ2 89 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 RNF208Q9H0X6 261 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 TXNRD2Q9NNW7 524 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 BRCA2P51587 3418 aa10.19□□□□□ -0.78
HMGXB4-207ENST00000498212 ZNFX1Q9P2E3 1918 aaKnown RBP10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 RNF113AO15541 343 aaKnown RBP10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 PEX10O60683 326 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 GABBR2O75899 941 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 INHAP05111 366 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 ELNP15502 786 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 VCAM1P19320 739 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 ERVK-9P63128 1117 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 ERVK-24P63145 666 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 C12orf60Q5U649 245 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 CATSPERGQ6ZRH7 1159 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 C16orf86Q6ZW13 317 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 STRBPQ96SI9 672 aaKnown RBP10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 PAGR1Q9BTK6 254 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 RBPJLQ9UBG7 517 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 ARPP21Q9UBL0 812 aaPredicted RBP10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 FRMPD3Q5JV73 1810 aa10.18□□□□□ -0.78
HMGXB4-207ENST00000498212 CYP2D7A0A087X1C5 515 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 A0A1W2PRG0 241 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 SMIM22K7EJ46 135 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 GLRX3O76003 335 aaKnown RBP10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 GJB1P08034 283 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 AKR1B1P15121 316 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 MX1P20591 662 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 MAPK4P31152 587 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 GJA8P48165 433 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 CDK8P49336 464 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 Q3C1V9 767 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 CCAR1Q8IX12 1150 aaKnown RBP10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 PI4K2BQ8TCG2 481 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 OTUD7AQ8TE49 926 aaPredicted RBP10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 OSBP2Q969R2 916 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 GCC1Q96CN9 775 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 SHISA4Q96DD7 197 aa10.17□□□□□ -0.78
HMGXB4-207ENST00000498212 CCDC17Q96LX7 622 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms