RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
TMC1-206ENST00000497073 CENPQQ7L2Z9 268 aaPredicted RBP9.05□□□□□ -0.96
TMC1-206ENST00000497073 MIGA2Q7L4E1 593 aa9.05□□□□□ -0.96
TMC1-206ENST00000497073 EAF2Q96CJ1 260 aaPredicted RBP9.05□□□□□ -0.96
TMC1-206ENST00000497073 MAP7D2Q96T17 732 aa9.05□□□□□ -0.96
TMC1-206ENST00000497073 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
TMC1-206ENST00000497073 CFHR5Q9BXR6 569 aa9.05□□□□□ -0.96
TMC1-206ENST00000497073 SNRKQ9NRH2 765 aa9.05□□□□□ -0.96
TMC1-206ENST00000497073 DBNLQ9UJU6 430 aaKnown RBP9.05□□□□□ -0.96
TMC1-206ENST00000497073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.05□□□□□ -0.96
TMC1-206ENST00000497073 THSD7BQ9C0I4 1608 aa9.05□□□□□ -0.96
TMC1-206ENST00000497073 A0A1B0GUL6 1792 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 APBB1O00213 710 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 TBC1D8O95759 1140 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 TERF1P54274 439 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 PPATQ06203 517 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 NFIAQ12857 509 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 SNAPC2Q13487 334 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 PICALMQ13492 652 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 DGKZQ13574 1117 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 TRIM47Q96LD4 638 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 DHX36Q9H2U1 1008 aaKnown RBP9.04□□□□□ -0.96
TMC1-206ENST00000497073 PICK1Q9NRD5 415 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
TMC1-206ENST00000497073 CCL15-CCL14A0A0B4J2E2 113 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 TESPA1A2RU30 521 aaPredicted RBP9.03□□□□□ -0.96
TMC1-206ENST00000497073 GPR25O00155 361 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 FKTNO75072 461 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 IDH1O75874 414 aaKnown RBP9.03□□□□□ -0.96
TMC1-206ENST00000497073 CYP2E1P05181 493 aaPredicted RBP9.03□□□□□ -0.96
TMC1-206ENST00000497073 CYP7A1P22680 504 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 ZAP70P43403 619 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 PPIL2Q13356 520 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 AAMPQ13685 434 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 CCL15Q16663 113 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 C8orf34Q49A92 452 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 PI16Q6UXB8 463 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 CTU1Q7Z7A3 348 aaKnown RBP9.03□□□□□ -0.96
TMC1-206ENST00000497073 TEX11Q8IYF3 940 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.03□□□□□ -0.96
TMC1-206ENST00000497073 ZKSCAN4Q969J2 545 aaPredicted RBP9.03□□□□□ -0.96
TMC1-206ENST00000497073 ABHD8Q96I13 439 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 GPATCH3Q96I76 525 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 LRRCC1Q9C099 1032 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 ZFYVE28Q9HCC9 887 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 IL1RAPL2Q9NP60 686 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
TMC1-206ENST00000497073 ATP13A2Q9NQ11 1180 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 ZNF112Q9UJU3 913 aa9.03□□□□□ -0.96
TMC1-206ENST00000497073 CTNND1O60716 968 aaKnown RBP9.02□□□□□ -0.97
TMC1-206ENST00000497073 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.97
TMC1-206ENST00000497073 FOXP4Q8IVH2 680 aaPredicted RBP9.02□□□□□ -0.97
TMC1-206ENST00000497073 ZNF296Q8WUU4 475 aaPredicted RBP9.02□□□□□ -0.97
TMC1-206ENST00000497073 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
TMC1-206ENST00000497073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
TMC1-206ENST00000497073 AATFQ9NY61 560 aaKnown RBP eCLIP9.02□□□□□ -0.97
TMC1-206ENST00000497073 PI4KBQ9UBF8 816 aa9.02□□□□□ -0.97
TMC1-206ENST00000497073 HERC5Q9UII4 1024 aaKnown RBP9.02□□□□□ -0.97
TMC1-206ENST00000497073 PRDM4Q9UKN5 801 aa9.02□□□□□ -0.97
TMC1-206ENST00000497073 ZNF646O15015 1829 aaPredicted RBP9.02□□□□□ -0.97
TMC1-206ENST00000497073 SSC5DA1L4H1 1573 aa9.02□□□□□ -0.97
TMC1-206ENST00000497073 POLR2AP24928 1970 aaKnown RBP9.01□□□□□ -0.97
TMC1-206ENST00000497073 CCDC85CA6NKD9 419 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 CXCL11O14625 94 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 IRF6O14896 467 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 HLA-DOAP06340 250 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 USP5P45974 858 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 GSK3AP49840 483 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 PRSS12P56730 875 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 RHBDL3P58872 404 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 MAP3K10Q02779 954 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 MFSD10Q14728 455 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 KIF22Q14807 665 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 NOL9Q5SY16 702 aaKnown RBP9.01□□□□□ -0.97
TMC1-206ENST00000497073 C20orf194Q5TEA3 1177 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 ZSCAN25Q6NSZ9 544 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 FASTKD5Q7L8L6 764 aaKnown RBP9.01□□□□□ -0.97
TMC1-206ENST00000497073 SIRT2Q8IXJ6 389 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 SCYL3Q8IZE3 742 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.01□□□□□ -0.97
TMC1-206ENST00000497073 MCOLN1Q9GZU1 580 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 OSBPL5Q9H0X9 879 aaPredicted RBP9.01□□□□□ -0.97
TMC1-206ENST00000497073 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
TMC1-206ENST00000497073 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 SNCAIPQ9Y6H5 919 aa9.01□□□□□ -0.97
TMC1-206ENST00000497073 GOLGA6L3A6NEY3 463 aa9□□□□□ -0.97
TMC1-206ENST00000497073 DDTLA6NHG4 134 aaPredicted RBP9□□□□□ -0.97
TMC1-206ENST00000497073 IGF2BP3O00425 579 aaKnown RBP eCLIP9□□□□□ -0.97
TMC1-206ENST00000497073 INPP5BP32019 993 aa9□□□□□ -0.97
TMC1-206ENST00000497073 GJA5P36382 358 aa9□□□□□ -0.97
TMC1-206ENST00000497073 SP3Q02447 781 aa9□□□□□ -0.97
TMC1-206ENST00000497073 BECN1Q14457 450 aa9□□□□□ -0.97
TMC1-206ENST00000497073 TAF1CQ15572 869 aaPredicted RBP9□□□□□ -0.97
TMC1-206ENST00000497073 LRRFIP1Q32MZ4 808 aaKnown RBP9□□□□□ -0.97
TMC1-206ENST00000497073 ZFPM1Q8IX07 1006 aa9□□□□□ -0.97
TMC1-206ENST00000497073 CRACR2BQ8N4Y2 399 aaPredicted RBP9□□□□□ -0.97
TMC1-206ENST00000497073 MAGEB6Q8N7X4 407 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms