RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 BRCA2P51587 3418 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 MBD4O95243 580 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 SGPL1O95470 568 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 HMGCRP04035 888 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 SHMT1P34896 483 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 CCNA1P78396 465 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 SOCS4Q8WXH5 440 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 NUDT12Q9BQG2 462 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 KIAA1683Q9H0B3 1180 aa15.29■□□□□ 0.04
PPM1F-209ENST00000497072 DCP1AQ9NPI6 582 aaPredicted RBP15.29■□□□□ 0.04
PPM1F-209ENST00000497072 SMARCA5O60264 1052 aaPredicted RBP15.28■□□□□ 0.04
PPM1F-209ENST00000497072 GLRX3O76003 335 aaKnown RBP15.28■□□□□ 0.04
PPM1F-209ENST00000497072 ERVK-9P63128 1117 aa15.28■□□□□ 0.04
PPM1F-209ENST00000497072 ERVK-24P63145 666 aa15.28■□□□□ 0.04
PPM1F-209ENST00000497072 UBE3CQ15386 1083 aa15.28■□□□□ 0.04
PPM1F-209ENST00000497072 ECHDC1Q9NTX5 307 aa15.28■□□□□ 0.04
PPM1F-209ENST00000497072 FARP2O94887 1054 aaPredicted RBP15.27■□□□□ 0.04
PPM1F-209ENST00000497072 GABPAQ06546 454 aa15.27■□□□□ 0.04
PPM1F-209ENST00000497072 TMEM179Q6ZVK1 233 aa15.27■□□□□ 0.04
PPM1F-209ENST00000497072 TRMT44Q8IYL2 757 aaKnown RBP15.27■□□□□ 0.04
PPM1F-209ENST00000497072 SHISA4Q96DD7 197 aa15.27■□□□□ 0.04
PPM1F-209ENST00000497072 DEFB118Q96PH6 123 aa15.27■□□□□ 0.04
PPM1F-209ENST00000497072 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
PPM1F-209ENST00000497072 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.04
PPM1F-209ENST00000497072 RABGAP1Q9Y3P9 1069 aa15.27■□□□□ 0.04
PPM1F-209ENST00000497072 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.03
PPM1F-209ENST00000497072 VCAM1P19320 739 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 CYP2B6P20813 491 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 SEPT2Q15019 361 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 LRRFIP1Q32MZ4 808 aaKnown RBP15.26■□□□□ 0.03
PPM1F-209ENST00000497072 WDR78Q5VTH9 848 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 PLEKHH3Q7Z736 793 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 ACER1Q8TDN7 264 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.03
PPM1F-209ENST00000497072 DCTPP1Q9H773 170 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 ARHGEF10LQ9HCE6 1279 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 TXNRD2Q9NNW7 524 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 RBPJLQ9UBG7 517 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 GJD2Q9UKL4 321 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 SLC4A4Q9Y6R1 1079 aa15.26■□□□□ 0.03
PPM1F-209ENST00000497072 RPTORQ8N122 1335 aa15.25■□□□□ 0.03
PPM1F-209ENST00000497072 RGS2P41220 211 aa15.25■□□□□ 0.03
PPM1F-209ENST00000497072 CCDC17Q96LX7 622 aa15.25■□□□□ 0.03
PPM1F-209ENST00000497072 RPAP3Q9H6T3 665 aaPredicted RBP15.25■□□□□ 0.03
PPM1F-209ENST00000497072 PAK6Q9NQU5 681 aaPredicted RBP15.25■□□□□ 0.03
PPM1F-209ENST00000497072 NR2E3Q9Y5X4 410 aa15.25■□□□□ 0.03
PPM1F-209ENST00000497072 IVNS1ABPQ9Y6Y0 642 aa15.25■□□□□ 0.03
PPM1F-209ENST00000497072 DOCK3Q8IZD9 2030 aa15.25■□□□□ 0.03
PPM1F-209ENST00000497072 DDX60LQ5H9U9 1706 aaKnown RBP15.24■□□□□ 0.03
PPM1F-209ENST00000497072 USP17L12C9JPN9 530 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 USP17L21D6R901 530 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 PRKAB2O43741 272 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 CYP2D6P10635 497 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 XRCC5P13010 732 aaKnown RBP15.24■□□□□ 0.03
PPM1F-209ENST00000497072 ZKSCAN1P17029 563 aaPredicted RBP15.24■□□□□ 0.03
PPM1F-209ENST00000497072 Q3C1V9 767 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 GPR142Q7Z601 462 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 TANGO6Q9C0B7 1094 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 HOXC10Q9NYD6 342 aa15.24■□□□□ 0.03
PPM1F-209ENST00000497072 MYH7P12883 1935 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 ERC2O15083 957 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 ZFYP08048 801 aaPredicted RBP15.23■□□□□ 0.03
PPM1F-209ENST00000497072 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 ICA1Q05084 483 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 SLFNL1Q499Z3 407 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 HABP4Q5JVS0 413 aaKnown RBP15.23■□□□□ 0.03
PPM1F-209ENST00000497072 C12orf60Q5U649 245 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 LPAR1Q92633 364 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 DYNLL2Q96FJ2 89 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 PORCNQ9H237 461 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
PPM1F-209ENST00000497072 MYH8P13535 1937 aa15.23■□□□□ 0.03
PPM1F-209ENST00000497072 H0YGN5 161 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 PEX10O60683 326 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 CDK8P49336 464 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 ATP2B2Q01814 1243 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 COG2Q14746 738 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 LBX2Q6XYB7 198 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 NECAB2Q7Z6G3 386 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 KBTBD3Q8NAB2 608 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 ANKLE1Q8NAG6 615 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 TRIB2Q92519 343 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 APBA2Q99767 749 aa15.22■□□□□ 0.03
PPM1F-209ENST00000497072 PUS7LQ9H0K6 701 aaKnown RBP15.22■□□□□ 0.03
PPM1F-209ENST00000497072 EVI5O60447 810 aa15.21■□□□□ 0.03
PPM1F-209ENST00000497072 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
PPM1F-209ENST00000497072 AKR1B1P15121 316 aa15.21■□□□□ 0.03
PPM1F-209ENST00000497072 EVX2Q03828 476 aa15.21■□□□□ 0.03
PPM1F-209ENST00000497072 C16orf86Q6ZW13 317 aa15.21■□□□□ 0.03
PPM1F-209ENST00000497072 UBE2Q1Q7Z7E8 422 aa15.21■□□□□ 0.03
PPM1F-209ENST00000497072 APPBP2Q92624 585 aa15.21■□□□□ 0.03
PPM1F-209ENST00000497072 CRISPLD2Q9H0B8 497 aa15.21■□□□□ 0.03
PPM1F-209ENST00000497072 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
PPM1F-209ENST00000497072 BAZ2AQ9UIF9 1905 aaKnown RBP15.2■□□□□ 0.02
PPM1F-209ENST00000497072 CYP2D7A0A087X1C5 515 aa15.2■□□□□ 0.02
PPM1F-209ENST00000497072 A0A1W2PRG0 241 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms