RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 SPACA3Q8IXA5 215 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 STK11IPQ8N1F8 1099 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 COX4I2Q96KJ9 171 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 GMIPQ9P107 970 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 SLC5A6Q9Y289 635 aa8.09□□□□□ -1.11
SNX13-211ENST00000496855 SLC22A31A6NKX4 558 aa8.08□□□□□ -1.12
SNX13-211ENST00000496855 PRR33A8MZF0 331 aa8.08□□□□□ -1.12
SNX13-211ENST00000496855 GP2P55259 537 aaKnown RBP8.08□□□□□ -1.12
SNX13-211ENST00000496855 PRKCQQ04759 706 aa8.08□□□□□ -1.12
SNX13-211ENST00000496855 PAK2Q13177 524 aa8.08□□□□□ -1.12
SNX13-211ENST00000496855 NPM2Q86SE8 214 aaKnown RBP8.08□□□□□ -1.12
SNX13-211ENST00000496855 VAV3Q9UKW4 847 aa8.08□□□□□ -1.12
SNX13-211ENST00000496855 SNX11Q9Y5W9 270 aa8.08□□□□□ -1.12
SNX13-211ENST00000496855 PHACTR4Q8IZ21 702 aa8.07□□□□□ -1.12
SNX13-211ENST00000496855 MFSD4AQ8N468 514 aa8.07□□□□□ -1.12
SNX13-211ENST00000496855 FLCNQ8NFG4 579 aa8.07□□□□□ -1.12
SNX13-211ENST00000496855 HRASLS5Q96KN8 279 aa8.07□□□□□ -1.12
SNX13-211ENST00000496855 CCDC74BQ96LY2 380 aa8.07□□□□□ -1.12
SNX13-211ENST00000496855 FBXL18Q96ME1 805 aa8.07□□□□□ -1.12
SNX13-211ENST00000496855 CAPN6Q9Y6Q1 641 aa8.07□□□□□ -1.12
SNX13-211ENST00000496855 CBX7O95931 251 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 KIR3DL1P43629 444 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 CLCN7P51798 805 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 RAD51AP2Q09MP3 1159 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 BNIP3Q12983 259 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 AOC3Q16853 763 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 ARSHQ5FYA8 562 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 OVOS1Q6IE37 1185 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 BAHD1Q8TBE0 780 aaPredicted RBP8.06□□□□□ -1.12
SNX13-211ENST00000496855 TGIF2Q9GZN2 237 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 FAM155AB1AL88 458 aaPredicted RBP8.06□□□□□ -1.12
SNX13-211ENST00000496855 TCF3P15923 654 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 TNNI2P48788 182 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 LRRFIP1Q32MZ4 808 aaKnown RBP8.06□□□□□ -1.12
SNX13-211ENST00000496855 CDCP2Q5VXM1 449 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 SPRED2Q7Z698 418 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 WFDC3Q8IUB2 231 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 KIF2CQ99661 725 aa8.06□□□□□ -1.12
SNX13-211ENST00000496855 PAK6Q9NQU5 681 aaPredicted RBP8.06□□□□□ -1.12
SNX13-211ENST00000496855 OAS3Q9Y6K5 1087 aaKnown RBP8.06□□□□□ -1.12
SNX13-211ENST00000496855 RBAK-RBAKDNI3L0D1 243 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 RGS13O14921 159 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 RAG1P15918 1043 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 ZNF574Q6ZN55 896 aaPredicted RBP8.05□□□□□ -1.12
SNX13-211ENST00000496855 TP53INP2Q8IXH6 220 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 TMEM40Q8WWA1 233 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 ATG4CQ96DT6 458 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 SPATA32Q96LK8 384 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 ANTXR1Q9H6X2 564 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 CNNM2Q9H8M5 875 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 ZNRF3Q9ULT6 936 aa8.05□□□□□ -1.12
SNX13-211ENST00000496855 MEIS3P2A8K0S8 358 aa8.04□□□□□ -1.12
SNX13-211ENST00000496855 GBP1P32455 592 aa8.04□□□□□ -1.12
SNX13-211ENST00000496855 NLRC3Q7RTR2 1065 aa8.04□□□□□ -1.12
SNX13-211ENST00000496855 RASGRP4Q8TDF6 673 aa8.04□□□□□ -1.12
SNX13-211ENST00000496855 ASB11Q8WXH4 323 aa8.04□□□□□ -1.12
SNX13-211ENST00000496855 GPRASP2Q96D09 838 aa8.04□□□□□ -1.12
SNX13-211ENST00000496855 COL17A1Q9UMD9 1497 aaPredicted RBP8.03□□□□□ -1.12
SNX13-211ENST00000496855 CD8BP10966 210 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 IMPDH2P12268 514 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 CD96P40200 585 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 GJA8P48165 433 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 TNK2Q07912 1038 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 COL9A2Q14055 689 aaPredicted RBP8.03□□□□□ -1.12
SNX13-211ENST00000496855 CDKAL1Q5VV42 579 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 Q96M66 194 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 HSPA12BQ96MM6 686 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 FERD3LQ96RJ6 166 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 ACBD3Q9H3P7 528 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 CCSER2Q9H7U1 834 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 GINM1Q9NU53 330 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 ST14Q9Y5Y6 855 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
SNX13-211ENST00000496855 UBOX5O94941 541 aa8.02□□□□□ -1.13
SNX13-211ENST00000496855 ERCC5P28715 1186 aaPredicted RBP8.02□□□□□ -1.13
SNX13-211ENST00000496855 PIWIL2Q8TC59 973 aaKnown RBP8.02□□□□□ -1.13
SNX13-211ENST00000496855 KREMEN1Q96MU8 473 aa8.02□□□□□ -1.13
SNX13-211ENST00000496855 PPT2Q9UMR5 302 aa8.02□□□□□ -1.13
SNX13-211ENST00000496855 E9PSI1 815 aa8.01□□□□□ -1.13
SNX13-211ENST00000496855 NME1P15531 152 aaKnown RBP8.01□□□□□ -1.13
SNX13-211ENST00000496855 POLR2BP30876 1174 aaKnown RBP8.01□□□□□ -1.13
SNX13-211ENST00000496855 ABI1Q8IZP0 508 aa8.01□□□□□ -1.13
SNX13-211ENST00000496855 SEMA3GQ9NS98 782 aa8.01□□□□□ -1.13
SNX13-211ENST00000496855 EFR3BQ9Y2G0 817 aa8.01□□□□□ -1.13
SNX13-211ENST00000496855 H3BS24 57 aa8□□□□□ -1.13
SNX13-211ENST00000496855 SOX9P48436 509 aa8□□□□□ -1.13
SNX13-211ENST00000496855 THAP5Q7Z6K1 395 aa8□□□□□ -1.13
SNX13-211ENST00000496855 DTWD2Q8NBA8 298 aa8□□□□□ -1.13
SNX13-211ENST00000496855 ASPNQ9BXN1 380 aa8□□□□□ -1.13
SNX13-211ENST00000496855 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8□□□□□ -1.13
SNX13-211ENST00000496855 KCNH3Q9ULD8 1083 aa8□□□□□ -1.13
SNX13-211ENST00000496855 INPP5FQ9Y2H2 1132 aa8□□□□□ -1.13
SNX13-211ENST00000496855 TNFRSF10CO14798 259 aa8□□□□□ -1.13
SNX13-211ENST00000496855 LRRN2O75325 713 aa8□□□□□ -1.13
SNX13-211ENST00000496855 CCNFP41002 786 aa8□□□□□ -1.13
SNX13-211ENST00000496855 CHMP4BP1P59074 171 aa8□□□□□ -1.13
SNX13-211ENST00000496855 ANGEL2Q5VTE6 544 aaKnown RBP8□□□□□ -1.13
SNX13-211ENST00000496855 FBXW10Q5XX13 1052 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms