RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 GRM4Q14833 912 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 SLC4A8Q2Y0W8 1093 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 PPP4R3BQ5MIZ7 849 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 KIAA0825Q8IV33 1275 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 PNMA1Q8ND90 353 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 FOXP1Q9H334 677 aaPredicted RBP17.63■□□□□ 0.41
COL15A1-204ENST00000496686 DDX4Q9NQI0 724 aaKnown RBP17.63■□□□□ 0.41
COL15A1-204ENST00000496686 CNTNAP5Q8WYK1 1306 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 KIF28PB7ZC32 967 aa17.62■□□□□ 0.41
COL15A1-204ENST00000496686 ZBTB7AO95365 584 aa17.62■□□□□ 0.41
COL15A1-204ENST00000496686 RSBN1LQ6PCB5 846 aaPredicted RBP17.62■□□□□ 0.41
COL15A1-204ENST00000496686 FAM177A1Q8N128 213 aaPredicted RBP17.62■□□□□ 0.41
COL15A1-204ENST00000496686 LARGE2Q8N3Y3 721 aa17.62■□□□□ 0.41
COL15A1-204ENST00000496686 KCNG4Q8TDN1 519 aa17.62■□□□□ 0.41
COL15A1-204ENST00000496686 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
COL15A1-204ENST00000496686 GRPEL1Q9HAV7 217 aa17.62■□□□□ 0.41
COL15A1-204ENST00000496686 DDX19AQ9NUU7 478 aaKnown RBP17.62■□□□□ 0.41
COL15A1-204ENST00000496686 SERPINB13Q9UIV8 391 aa17.62■□□□□ 0.41
COL15A1-204ENST00000496686 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
COL15A1-204ENST00000496686 VIL1P09327 827 aaKnown RBP17.61■□□□□ 0.41
COL15A1-204ENST00000496686 TOP1P11387 765 aaKnown RBP17.61■□□□□ 0.41
COL15A1-204ENST00000496686 GUCY1A2P33402 732 aa17.61■□□□□ 0.41
COL15A1-204ENST00000496686 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
COL15A1-204ENST00000496686 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
COL15A1-204ENST00000496686 GAS2L3Q86XJ1 694 aa17.61■□□□□ 0.41
COL15A1-204ENST00000496686 PGBD1Q96JS3 809 aa17.61■□□□□ 0.41
COL15A1-204ENST00000496686 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
COL15A1-204ENST00000496686 CD2APQ9Y5K6 639 aa17.61■□□□□ 0.41
COL15A1-204ENST00000496686 IGKV6D-41A0A0C4DH26 115 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 ENTPD3O75355 529 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 MMP14P50281 582 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 PKN1Q16512 942 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 SRBD1Q8N5C6 995 aaKnown RBP17.6■□□□□ 0.41
COL15A1-204ENST00000496686 LINC00301Q8NCQ3 95 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 CCDC17Q96LX7 622 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 TMEM47Q9BQJ4 181 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 HDAC9Q9UKV0 1011 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 ADAMTSL1Q8N6G6 1762 aa17.6■□□□□ 0.41
COL15A1-204ENST00000496686 A0A1W2PQ27 194 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 A0A1W2PQ64 194 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 A0A1W2PQD8 194 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 SYCE3A1L190 88 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 SMARCA1P28370 1054 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 RBM5P52756 815 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL15A1-204ENST00000496686 STK38Q15208 465 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 ANO1Q5XXA6 986 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 NOSTRINQ8IVI9 506 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 NIM1KQ8IY84 436 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 DIS3L2Q8IYB7 885 aaKnown RBP17.59■□□□□ 0.41
COL15A1-204ENST00000496686 BICD2Q8TD16 824 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 GMLQ99445 158 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 ZNRF3Q9ULT6 936 aa17.59■□□□□ 0.41
COL15A1-204ENST00000496686 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
COL15A1-204ENST00000496686 ATRNL1Q5VV63 1379 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 NFIAQ12857 509 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 CFAP100Q494V2 611 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
COL15A1-204ENST00000496686 AGBL3Q8NEM8 1001 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 PHF20Q9BVI0 1012 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 BRMS1Q9HCU9 246 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 SH3GLB2Q9NR46 395 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
COL15A1-204ENST00000496686 FAM198AQ9UFP1 575 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 STX8Q9UNK0 236 aa17.58■□□□□ 0.4
COL15A1-204ENST00000496686 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
COL15A1-204ENST00000496686 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.4
COL15A1-204ENST00000496686 PALM3A6NDB9 673 aaPredicted RBP17.57■□□□□ 0.4
COL15A1-204ENST00000496686 UBE2Q2LH0YL09 131 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 SPTLC2O15270 562 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 XRCC6P12956 609 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL15A1-204ENST00000496686 SCG2P13521 617 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 LIG1P18858 919 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 SHMT1P34896 483 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 SLC39A14Q15043 492 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 PFKFB3Q16875 520 aaPredicted RBP17.57■□□□□ 0.4
COL15A1-204ENST00000496686 ADALQ6DHV7 355 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 METTL16Q86W50 562 aaKnown RBP17.57■□□□□ 0.4
COL15A1-204ENST00000496686 FOXP4Q8IVH2 680 aaPredicted RBP17.57■□□□□ 0.4
COL15A1-204ENST00000496686 CCDC82Q8N4S0 544 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 JMYQ8N9B5 988 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 CEP95Q96GE4 821 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 TAOK3Q9H2K8 898 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 MTMR4Q9NYA4 1195 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 PI4KBQ9UBF8 816 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 MAD2L2Q9UI95 211 aa17.57■□□□□ 0.4
COL15A1-204ENST00000496686 LTBP3Q9NS15 1303 aa17.56■□□□□ 0.4
COL15A1-204ENST00000496686 COL4A5P29400 1685 aa17.56■□□□□ 0.4
COL15A1-204ENST00000496686 PSMD14O00487 310 aa17.56■□□□□ 0.4
COL15A1-204ENST00000496686 PPP6R2O75170 966 aa17.56■□□□□ 0.4
COL15A1-204ENST00000496686 KRT2P35908 639 aa17.56■□□□□ 0.4
COL15A1-204ENST00000496686 ME1P48163 572 aa17.56■□□□□ 0.4
COL15A1-204ENST00000496686 CEBPZQ03701 1054 aaKnown RBP17.56■□□□□ 0.4
COL15A1-204ENST00000496686 R3HDM1Q15032 1099 aaKnown RBP17.56■□□□□ 0.4
COL15A1-204ENST00000496686 SF3A1Q15459 793 aaKnown RBP17.56■□□□□ 0.4
COL15A1-204ENST00000496686 RILPL1Q5EBL4 403 aa17.56■□□□□ 0.4
COL15A1-204ENST00000496686 MTMR14Q8NCE2 650 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms